Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00762 ATGGCTCCAAAGAAGGATAAGGCTCCTCCACCATCTTCTAAACCCGCCAAATCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACCAGGTGCTGTTTGATCAGGGTACTTATGACAAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCGCTTGCAAGGAGGGCTATAAGAGAGTTGATGGCTAGAGGGTCAATTAGACTGGTCTCCGCGCACGCAAGTCAGCAGATTTACACAAGAGCAACAAACACCTAG 327 0.4771 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNQVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMARGSIRLVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00762 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Aip03g00762 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Aip03g00762 108 MobiDBLite consensus disorder prediction 1 38 - -
Aip03g00762 108 Gene3D - 21 108 - -
Aip03g00762 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00762 Aip-Chr3 7290055 7291803 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00762 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 2.55e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00762 K02975 - gmx:100786842 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00762 03 7290055 7291803 Aip03g00762 03 7290055 7291803 ECH