Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00761 ATGAATATGATTATGGAAAAGAGAAGCTTTTCTGAATTCATGTCAGAGATAGTAGCTCTGGTTGATGAGGTTGCTTCATTTGCTATGAATCCTGAAGTTGAGATAGATGCTTTTACCGAGTTTGCCATGTTGGTTGAGAAATTGGCACCAATTTTCAGTGATTTGAGTGACAAAATCACAGTTATAGAAAACAAGCCATCCATCAGAAAATCTTTGGAATCGATCGAAACTTCGCTTAGCCGTGCTAAAGCTTTGAAAAAAAGTTCTAGCTTGAAAGACCCTAGCAAACATATTGAGGACACAACACATGATATTGGTCGATCACTAGGCCTATTGCTCCTTGAATTGTCCACAGATTTTAGAGAAAAGGTTGGTACATTGCAAAAACAGTTTATGAATGCAAGATTTGGTGGGAACATGAGCCTATCTTCAAGTCCAGTATCATTAGAGTTTGCAAATGATGTGTATGGTGGAGGGGAAATAGAAGAGGAAATAGTCAATGTTACTATAGAAGATGTTGTATTGCAACTTAAGAATGGTAACGATGAAGAATTTGCAGTTGCTCTTTGGAGACTAAAGGAGTTCATCAGGGATGAGAAGCTGGAAAGTTGTTTGGTTAATGAGGAAGCTGTTGTTGCTGTTCTGTTAAATAGACTGCGTTCGTGTAAGGCAGACAATAGACTTAACATCATTCAATTGTTACGAAATATGGCTTCAGGAAATGATGAGACAAAGGAGAAGATGGCAGAAACCGAGTTTTTATCAGCAGTGGTGAAGTCTCTAACAAGAGATGCAGAAGAGAGGAGGGAAGCAGTGGGACTGCTGCTAGAACTCTCTGATCTTCCTGCAGTTCGACGGCAAATTGGAAGAATTCAGGGGTGCATTGTAATGTTAGTCTCTATCCTTAATGGAAGCGACCCCATCGCTTCGCAAGGTGCAGCCAAGTTGTTGGATATATTGTCCAGTAATACTCAAAATGCACTTCACATGGCTGAGGCTGGTTACTTTAAGCCTCTAGTGCACTATTTGAAGAAAGGCTCTGACATGAACAAGATCCTTATGGCAACAGCACTTTCTAGGTTGGTGCTAACTGATCACAGCAAACTTTCCCTCGGCAAAGATGGGGCAATCGAGCCCCTTGTCAACATGTTTCACACTGGCAAACTTGAGTCCAAGTTGTCTGCTCTAAATGCCCTTCAAAATCTTTCCAGTGTGACAGAAAATGTGCAACTTCTAATCAGGTCTGGGATTGCAGGATCATTGCTGCAGCTTCTTTTTTCAGTAACATCTGTGCTAATGACTCTTAGGGAGCCAGCATCTGCTATTCTTGCAAGAATTGCTCAGTCAGAATCTATTATTGTTAATCAGGATGTTGCTCAGCAGATGCTCTCACTCTTGAACCTTTCCAGCCCAATAATTCAAGGCCATCTCTTGGAAGCTCTAAGTAGCATCGCTGCGCATCCTCGCGCATCTAAAGTGAGAAGAAAAATGAAAGAAAAAGGAGCACTTCAGCTAATTTTGCCTTTTCTGAAGGAAACTAACACTACAACAAGAAGCAAGGCCCTTAATTTGCTCTATACTCTTTCCAAAGATCTTACAGATGAGTTGAGTGAACATCTTGATGAAGCTCATCTTATTCACATTGTTAATATTGTCTCATCATCATCATCAGATAGTGAAAAGGCTGCAGCTCTTGGCATACTGAGTAATCTTCCAGTTAGTGATAAAAAGGTGACTGATATTCTGAAGAAAGCAAATTTGTTGTCTATTTTAATATCCAATATGGCTTCGAGCACTGGAAGTAACTCGCCTGTGACAAGAACCTTAGCTGAAATTGTTGCTTGTGTTATAGTTAGGTTCACAAATCCTTCTGACAAGAAACTGCAGCTCTATTCAGCTGAACAAGGGGTGATTCCTTTGCTTGTGAAACTTCTCTCAAGTGGTTCATCAATTGCAAAATTCAGAGCTGCGACTGCTTTGGCTCAGCTATCACAAAATTCTCTGTCCCTCAGGAGGAGTAGGAAGTCAAAGTGGTTTTGTGTAAATCCATCAGTAGAAGCATATTGTGAAGTGCATGATGGTTATTGCTATGTGAACTCCACATTTTGTCTGGTCAAGGCTGGTGCTGTTTCGGCACTTATCAAAATACTTGAAGATAAGGAGTGGGAAGCAGTTGAGGCTGCTCTGATTGCCCTTTCAACTCTTTTGCAAGACGAAATCTGTGAAGGCGGCATCAATTGCATAGCCAAGAATTCAGGTGTGCAAGCTATTATCAAAATTTTAGAAGCAGGTGATGTGAAGGTTCAAGAAAAAGCACTATGGATGTTGGACAGAATATTCAGGATTGAAGAGCACAGAGTAAAATATGGAGAATCAGCTCAGGTTTTTCTTATTGATTTGGCGCAGACGTGTGATTCTCGATTGAAGTCAACTGTTGCAAAAGTTTTGGCAGAGTTGGAGCTCCTGCAAGTTCAATCAAGTTATTTCTGA 2490 0.4064 MNMIMEKRSFSEFMSEIVALVDEVASFAMNPEVEIDAFTEFAMLVEKLAPIFSDLSDKITVIENKPSIRKSLESIETSLSRAKALKKSSSLKDPSKHIEDTTHDIGRSLGLLLLELSTDFREKVGTLQKQFMNARFGGNMSLSSSPVSLEFANDVYGGGEIEEEIVNVTIEDVVLQLKNGNDEEFAVALWRLKEFIRDEKLESCLVNEEAVVAVLLNRLRSCKADNRLNIIQLLRNMASGNDETKEKMAETEFLSAVVKSLTRDAEERREAVGLLLELSDLPAVRRQIGRIQGCIVMLVSILNGSDPIASQGAAKLLDILSSNTQNALHMAEAGYFKPLVHYLKKGSDMNKILMATALSRLVLTDHSKLSLGKDGAIEPLVNMFHTGKLESKLSALNALQNLSSVTENVQLLIRSGIAGSLLQLLFSVTSVLMTLREPASAILARIAQSESIIVNQDVAQQMLSLLNLSSPIIQGHLLEALSSIAAHPRASKVRRKMKEKGALQLILPFLKETNTTTRSKALNLLYTLSKDLTDELSEHLDEAHLIHIVNIVSSSSSDSEKAAALGILSNLPVSDKKVTDILKKANLLSILISNMASSTGSNSPVTRTLAEIVACVIVRFTNPSDKKLQLYSAEQGVIPLLVKLLSSGSSIAKFRAATALAQLSQNSLSLRRSRKSKWFCVNPSVEAYCEVHDGYCYVNSTFCLVKAGAVSALIKILEDKEWEAVEAALIALSTLLQDEICEGGINCIAKNSGVQAIIKILEAGDVKVQEKALWMLDRIFRIEEHRVKYGESAQVFLIDLAQTCDSRLKSTVAKVLAELELLQVQSSYF 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00761 829 SMART arm_5 490 530 IPR000225 GO:0005515
Aip03g00761 829 SMART arm_5 241 280 IPR000225 GO:0005515
Aip03g00761 829 SMART arm_5 364 404 IPR000225 GO:0005515
Aip03g00761 829 SMART arm_5 323 363 IPR000225 GO:0005515
Aip03g00761 829 SMART arm_5 741 781 IPR000225 GO:0005515
Aip03g00761 829 SMART arm_5 697 737 IPR000225 GO:0005515
Aip03g00761 829 SMART arm_5 625 665 IPR000225 GO:0005515
Aip03g00761 829 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 375 417 IPR000225 GO:0005515
Aip03g00761 829 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 5 829 - -
Aip03g00761 829 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 5 829 - -
Aip03g00761 829 SUPERFAMILY ARM repeat 169 427 IPR016024 -
Aip03g00761 829 Gene3D - 159 264 IPR011989 -
Aip03g00761 829 Gene3D - 265 676 IPR011989 -
Aip03g00761 829 SUPERFAMILY ARM repeat 353 784 IPR016024 -
Aip03g00761 829 Gene3D - 695 826 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00761 Aip-Chr3 7284169 7287426 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00761 180 829 U-box Gene Family AT1G76390 28.921 2.06e-50 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00761 K08332 - gmx:100791453 1099.35