Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00749 ATGGCTTCAACCACTCTTAGCAAACAAAAGAAGCCTTCTTCTGAGTCCTCATCAAGATGGACAGCAAAAGAAAATAAGCTCTTTGAGAAGGCACTTGCAGAATATGATAAAGATACTGCAGATAGGTGGCAGAATGTGGCAAAAGCAGTTGGTGGAAAATCTGTTGATGAAGTTAAGAGACATTATGAAATTCTCTTAGAAGATCTCAGACACATTGAGTCCGGCCATGTTCCAATTCCTAACTACAAGTCCACACCTTCAACCACCACCAATCTTGATGAAGAACAGAGGTATTATTATTAG 303 0.396 MASTTLSKQKKPSSESSSRWTAKENKLFEKALAEYDKDTADRWQNVAKAVGGKSVDEVKRHYEILLEDLRHIESGHVPIPNYKSTPSTTTNLDEEQRYYY 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00749 100 CDD SANT 19 66 IPR001005 -
Aip03g00749 100 MobiDBLite consensus disorder prediction 75 100 - -
Aip03g00749 100 Gene3D - 11 79 - -
Aip03g00749 100 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g00749 100 PANTHER PROTEIN RADIALIS-LIKE 3 1 85 - -
Aip03g00749 100 ProSiteProfiles SANT domain profile. 15 70 IPR017884 -
Aip03g00749 100 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Aip03g00749 100 SMART sant 16 68 IPR001005 -
Aip03g00749 100 MobiDBLite consensus disorder prediction 80 100 - -
Aip03g00749 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 85 IPR044636 GO:0003700
Aip03g00749 100 Pfam Myb-like DNA-binding domain 18 62 IPR001005 -
Aip03g00749 100 ProSiteProfiles Myb-like domain profile. 12 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00749 Aip-Chr3 7196844 7199144 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip03g00749 Myb_DNA-binding 9.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00749 - - ahf:112788989 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00749 03 7196844 7199144 Aip03g00749 03 7196844 7199144 ECH