Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00737 ATGGCGGTTTCCGGTAACTCCTCCGGCGAACCTCTACCTGAATTGAACACAACATCATCGGTTCTAGGCGTGAAGCTCGTGGTTCTAGTTGCAATTATCTTCATTGCGATCGTGGTAACGATCTTGCTCATCTTCTTCTTCTGCTTCAGAAGAAGCAGAACCTCCTCTTGCAGAAACCACAGAACCCTCGGGAAACATAGCTCAGGAACAATCCCTCTGGTTTCAAAGGAGATCAACGTCGTCAAATCCCTAGATCTCGAACAACAACAGCAACAGCAACAGATTCTCGAAGACGTTGTTGTTGTTGATGATGATCTAAAGAAGAAGAAGAAGGAGGAGGAGGAAGGTGAAGGCACCAAGAATAAAAAGAGTGAGGGAGAAGGGAGTGATGACGTGTCAATTTCCGGTGGGAGAAGGAGTGAGGCGTCGTCGATGTCGGTGGAGGATCCGAACATCGGGTGGGGGAGGTGGTATAGTCTGAAGGAGGTGGAGGTGGCGACACGTGGCTTCGCGGAGGAGAATGTCATTGGTGAAGGTGGCTATGGGATTGTATACAGAGGAGTTCTGCAAGATGGTTCTGTTGTTGCCGTCAAGAATCTTCTCAACAACAAGGGTCAAGCGGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTAAGGCATAAGAATTTGGTTGGGCTGGTAGGATATTGTGCAGAAGGTCCTAAAAGGATGCTTGTTTATGAATATGTTAACAATGGAAATTTGGAGCAGTGGCTGCATGGTGATGTAGGACCAGTTAGCCCCTTGACATGGGATATTCGGATGAAGATTGCCATTGGCACTGCTAAAGGGCTAGCTTACTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGAGATATAAAATCCAGTAACATTCTTTTGGACAAAAACTGGAATGCCAAAGTATCCGATTTTGGACTTGCCAAGCTCTTAGGATCCGAGAAAACCCACGTGACTACGCGTGTAATGGGAACATTTGGATATGTGTCACCTGAATATGCAAGCACCGGTATGCTTAATGAGCGCAGTGATGTGTATAGCTTCGGAGTTCTTCTCATGGAGATAATTACAGGAAGATCCCCCATTGATTATTCTAGACCTCCTGGAGAGATGAATTTGGTTGATTGGTTCAAGGGAATGGTAGCAAATCGTCGTGGTGAAGAGTTAGTCGATCCTTTAATCGAGGTTCAGCCCTCTCAAAGATCCCTGAAGCGAATGTTACTCATTTGTCTTCGCTGTATTGATTTGGATGTTGTTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCAGATGATTTTCCATTTCGTTCTGAAATTCGTACACTTAAAGAGAAAGACAATGTCCCTTCTTCTGCAGATGTTTCGAGTAAAAGAGTGCCATATGAATCAAAATATGCAGAGTCCATAGGAAAATCAAGATGGAAATAA 1467 0.4485 MAVSGNSSGEPLPELNTTSSVLGVKLVVLVAIIFIAIVVTILLIFFFCFRRSRTSSCRNHRTLGKHSSGTIPLVSKEINVVKSLDLEQQQQQQQILEDVVVVDDDLKKKKKEEEEGEGTKNKKSEGEGSDDVSISGGRRSEASSMSVEDPNIGWGRWYSLKEVEVATRGFAEENVIGEGGYGIVYRGVLQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPKRMLVYEYVNNGNLEQWLHGDVGPVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEELVDPLIEVQPSQRSLKRMLLICLRCIDLDVVKRPKMGQIVHMLEADDFPFRSEIRTLKEKDNVPSSADVSSKRVPYESKYAESIGKSRWK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00737 488 CDD STKc_IRAK 176 442 - -
Aip03g00737 488 PANTHER RECEPTOR-LIKE KINASE 18 487 - -
Aip03g00737 488 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Aip03g00737 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Aip03g00737 488 SUPERFAMILY Protein kinase-like (PK-like) 145 442 IPR011009 -
Aip03g00737 488 PANTHER OS01G0323000 PROTEIN 18 487 - -
Aip03g00737 488 MobiDBLite consensus disorder prediction 110 134 - -
Aip03g00737 488 MobiDBLite consensus disorder prediction 110 147 - -
Aip03g00737 488 MobiDBLite consensus disorder prediction 458 488 - -
Aip03g00737 488 Gene3D Phosphorylase Kinase; domain 1 137 245 - -
Aip03g00737 488 ProSiteProfiles Protein kinase domain profile. 170 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00737 488 Gene3D Transferase(Phosphotransferase) domain 1 246 454 - -
Aip03g00737 488 SMART serkin_6 170 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00737 488 Pfam Protein tyrosine and serine/threonine kinase 173 441 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00737 Aip-Chr3 7082828 7086297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00737 138 442 Receptor kinase-like Gene Family AT4G02010 47.573 6.63e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip03g00737 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00737 - - lang:109351508 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00737 03 7082828 7086297 Aip03g00737 03 7082828 7086297 ECH