Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00715 ATGACTGAGGCCAAAGCAGTTGAAGCTGCAACTAACAACAACACTAACCACCTTGCGGATTTCGATCCTCACAAGAAGAAACCTAAAAGGAACAAATATGCTTTTGCTTGTGCCATTTTGGCTTCCATGACTTCAATCTTACTTGGCTATGATATTGGTGTGATGAGTGGAGCAGCAATCTACATAAAAAGGGACCTTAAAGTTTCTGACGTCCAAATTGAAATTTTATTGGGAATTATCAATCTGTATTCCTTGATAGGGTCATGTTTGGCCGGAAGAACCTCCGACTGGATCGGACGCCGGTACACAATAGTGCTCGCCGGCGCTATCTTCTTCGCCGGAGCGATTTTGATGGGATTCTCTCCCAACTACTCGTTCCTCATGTTCGGGCGATTCGTTGCCGGCATTGGCATCGGATACGCCCTCATGATTGCTCCCGTTTACACCGCCGAAGTCTCCCCTGCTTCCTCCCGTGGATTCCTCACCTCCTTCCCTGAGGTGTTCATCAATGGAGGAATATTACTAGGATACATATCAAACTACGCATTCTCAAAAATGAAACTTCAACTCGGTTGGAGAATGATGCTCGGAATCGGAGCTGTTCCTTCAGTGATCCTAGCAGTAGGAGTGTTAGCTATGCCAGAATCACCAAGGTGGCTCGTAATGAGGGGCCGCCTTGGCGATGCAAGAAAAGTGCTAAACAAAACTTCCGACACAAAAGAAGAAGCTCAAGAACGCCTCTCAGACATTAAAAAAGCCGCCGGTATTCCAGAACACTGTAACGACGACGTCGTTCAGGTCGCAAAGCAGAACACCGGCGAGGGTGTATGGAAGGAGCTTTTCCTCTACCCTACACCCGCAGTTCGTCACATCCTAATCGCTGCACTCGGCATACACTTCTTCCAACAAGCGTCCGGCATAGACGCCGTCGTTTTGTATAGCCCTAGAATATTCGAGAAGGCTGGGATCACTAGCGACACCGATAAGCTTCTTGCAACCGTGGCCGTTGGATTTGTTAAGACTCTGTTCATCTTGGTTGCCACGTTTATGTTGGATCGTGTGGGTAGGCGTCCACTGTTACTATCCAGTGTGGGCGGTATGATACTCTCTGTTTTCACGCTCGGTATTAGCCTTACGATTATTACTCACTCCGATAAGAAGCTTATGTGGGCCGTTGGATTGAGTATTGCAACGGTTTTGTCCTACGTGGCCACGTTTTCGATCGGTGCGGGTCCCATCACGTGGGTTTATAGCTCTGAGATTTTTCCGTTGAGGTTGAGGGCGCAGGGCGCGGCTATGGGTGTTGTGGTGAATAGAGTCACCAGTGGGGTTATTTCAATGACCTTTTTGTCCCTGTCCAAGGCAATTTCTATTGGTGGTGCATTCTTCCTTTTCGGTGGAATTGCCACTGTTGGGTGGATATTCTTCTATACCATGCTACCTGAAACAAGAGGTAAGACTCTTGAGGACATGGAAGGGTCTTTTGGTCAATTCAGGGCTAACCCTGCTGGTACTAAGGGAGTTGACAATGGTAATAAGGGACAAGTCCAGCTAGGAACAACAACCAATAATGTCCAATCTTAG 1584 0.4773 MTEAKAVEAATNNNTNHLADFDPHKKKPKRNKYAFACAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILLGIINLYSLIGSCLAGRTSDWIGRRYTIVLAGAIFFAGAILMGFSPNYSFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKMKLQLGWRMMLGIGAVPSVILAVGVLAMPESPRWLVMRGRLGDARKVLNKTSDTKEEAQERLSDIKKAAGIPEHCNDDVVQVAKQNTGEGVWKELFLYPTPAVRHILIAALGIHFFQQASGIDAVVLYSPRIFEKAGITSDTDKLLATVAVGFVKTLFILVATFMLDRVGRRPLLLSSVGGMILSVFTLGISLTIITHSDKKLMWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGAAMGVVVNRVTSGVISMTFLSLSKAISIGGAFFLFGGIATVGWIFFYTMLPETRGKTLEDMEGSFGQFRANPAGTKGVDNGNKGQVQLGTTTNNVQS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00715 527 ProSitePatterns Sugar transport proteins signature 2. 133 158 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip03g00715 527 SUPERFAMILY MFS general substrate transporter 13 492 IPR036259 -
Aip03g00715 527 Pfam Sugar (and other) transporter 37 493 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip03g00715 527 PRINTS Sugar transporter signature 45 55 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00715 527 PRINTS Sugar transporter signature 128 147 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00715 527 PRINTS Sugar transporter signature 302 312 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00715 527 PRINTS Sugar transporter signature 396 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00715 527 PRINTS Sugar transporter signature 419 431 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00715 527 TIGRFAM SP: MFS transporter, sugar porter (SP) family 23 490 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00715 527 CDD MFS_PLT 40 491 IPR044776 GO:0005351
Aip03g00715 527 PANTHER SUGAR TRANSPORTER 20 516 - -
Aip03g00715 527 Coils Coil 226 253 - -
Aip03g00715 527 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 20 516 IPR045262 GO:0015144
Aip03g00715 527 Gene3D MFS general substrate transporter like domains 27 497 IPR036259 -
Aip03g00715 527 ProSitePatterns Sugar transport proteins signature 1. 91 108 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip03g00715 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 484 IPR020846 GO:0022857
Aip03g00715 527 MobiDBLite consensus disorder prediction 502 527 - -
Aip03g00715 527 MobiDBLite consensus disorder prediction 508 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00715 Aip-Chr3 6885725 6888352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00715 9 523 Organic Solute Cotransporters AT3G18830 72.500 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00715 - - lja:Lj3g3v3338420.1 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00715 03 6885725 6888352 Aip08g00291 08 2176188 2178821 PCT