Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00687 ATGGAAGAAGAGGGGGGAAGGGAAGGGGAAGGGAATCCGCTACCACTGCTCTTCGTCGTTTGGTTGCTGGATCTCGCCGCTGTTTTTCGTCGTTCGGTCCTCGTCGCTGCTCATCGACATCGGCGTCAGCAGATCCGCGAGGGTGGACGTCGCGTGCCGTTCTCTCCTTGCCGTTTCTGCTTCTCCTCCTCGCTTGGTCTCCGACCACCGCTGCTTCCGATCAGGTTTGCTGTTTTCTTGGTCCACTTGGCAACCATTCCTATCACTAGAACTGGGATTAACTTAGCTAGGAGCCTTGGTGCTGCTATCATTTTCAACAGAGACCATGCATGGAATGATCAATGGATTTTTGGGGTTGGACCTTTCATTGGAGTTGCTCACACCGCCATGTACCATCAAGTCAAGGCCTTAATTCATCATCATCATTTCATATGTTTGCTCCTTTCTTTGAATGTTTGA 459 0.5076 MEEEGGREGEGNPLPLLFVVWLLDLAAVFRRSVLVAAHRHRRQQIREGGRRVPFSPCRFCFSSSLGLRPPLLPIRFAVFLVHLATIPITRTGINLARSLGAAIIFNRDHAWNDQWIFGVGPFIGVAHTAMYHQVKALIHHHHFICLLLSLNV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00687 152 PRINTS Major intrinsic protein family signature 115 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00687 152 PRINTS Major intrinsic protein family signature 75 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00687 152 PANTHER AQUAPORIN PIP1-2-RELATED 72 134 - -
Aip03g00687 152 Gene3D Glycerol uptake facilitator protein. 33 141 IPR023271 -
Aip03g00687 152 Pfam Major intrinsic protein 72 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00687 152 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 72 134 IPR034294 -
Aip03g00687 152 SUPERFAMILY Aquaporin-like 72 135 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00687 Aip-Chr3 6675126 6675660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00687 72 134 Major Intrinsic Protein MIP AT1G01620 79.365 3.29e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00687 K09872 - qsu:112000363 110.538