LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g00677	ATGGCATCCTCCGCCCCTAACAATAATAATAATCTTCCGCTGAAGCCCATTCCGGGAAGCTACGGCCTCCCGTTCTTGGGCCCCTTACACGACCGCCACGACTACTTCTACAAACAAGGCCGCGACGAATTCTTCGCCACCAGGATCCAAAAGTACAACTCCACCGTCATCAGAACCAACATGCCGCCTGGTCCCTTCATTGCTCATGACCCTAAGGTCGTCGCTCTCCTCGACGCCGCCTCTTTCCCCATCCTCTTCGACAACTCTAAGGTCGATAAGCGCGACGTCCTTGACGGCACTTTCATGCCTTCTACCGCCTTCACCGGCGGCTACCGCACCTGCGCCTTCCAAGATACTACTGAACCCGAACACTCTCTCCTCAAATCCTTCTTTCTCCATATTCTCTCCTCCAAACACAACATCTTCCTCCCTCTCTTCCGAAGCGTTCTCACCGATCATTTCAATAACATGGAAGAAAGTCTCGCCGGAAAGTCCAAAGAAGCCAGCTACAACACCTCCATCGGTGCCGCCACCTTCACTTTCATCTTCCGTCTCCTCACTGACAAGGATCCAAACACCACCGTCATCGGAAGCGAAGGTCCGAAGCTCGTGGAGACCTGGCTCGGAGCTCAGCTCGCTCCTCTCGCAACGCTAGGGTTACCGAAAATCTTCAACTACGTCGAAGATGTACTGATCCGAACGGTGCCGTTTCCGGCGTGGGCCGTAAAAGGCAGCTACAACAAGCTCTACGAAGGAGTATCGACGGCGGGGACGGCGGTGCTGGACGAAGCGGAGAAATTAGGAATCAAAAGAGACGAAGCATGCCACAACCTTGTTTTCATGTTAGGGTTCAACGCTTTCGGTGGTTTATCGAACCAGTTTCCGATCCTAATCAAGTGGATAGGTTTGGCAGGGGAGGGTTTACACAAGCAACTCGCTGATGAAATCAGGACCGTTGTTAGGGACGAAGGCGGGGTAGTGAGTCTTGCAGCGTTGGATAAGATGACTTTGACCAAATCAGTGGTGTACGAAGTACTGAGGATAGAGCCTGCTGTGCCGTACCAGTACGCCAAAGCGAGGGAGGATCTGGTGGTGCAGAGCCACGATGCGGCCTACGAGATCAAGAAAGGGGAGATGATCTTTGGATATCAGCCGTTCGCTACGAAGGACCCGAAGATCTTTGAGAATCCCGAGGATTTTGTGGGCCATAGGTTTATTGGAGATGGAGAGAGGCTGTTGAGACACGTGTTATGGTCTAATGGGCGTGAGGTGGACGAGCCCACAGCGGATAACAAGCAGTGCCCGGCGAAGAATCTTGTGGTGCTGCTGTGTAGGGTGTATTTGGTGGAGTTCTTCTTGCATTATGACACGTTTGCATTCGATTGGAAGCCACTTGTTTTGGGTCCCACAGTTACCATCAAGTCCTTAACCAAGACCTCCActttttaa	1449	0.5217	MASSAPNNNNNLPLKPIPGSYGLPFLGPLHDRHDYFYKQGRDEFFATRIQKYNSTVIRTNMPPGPFIAHDPKVVALLDAASFPILFDNSKVDKRDVLDGTFMPSTAFTGGYRTCAFQDTTEPEHSLLKSFFLHILSSKHNIFLPLFRSVLTDHFNNMEESLAGKSKEASYNTSIGAATFTFIFRLLTDKDPNTTVIGSEGPKLVETWLGAQLAPLATLGLPKIFNYVEDVLIRTVPFPAWAVKGSYNKLYEGVSTAGTAVLDEAEKLGIKRDEACHNLVFMLGFNAFGGLSNQFPILIKWIGLAGEGLHKQLADEIRTVVRDEGGVVSLAALDKMTLTKSVVYEVLRIEPAVPYQYAKAREDLVVQSHDAAYEIKKGEMIFGYQPFATKDPKIFENPEDFVGHRFIGDGERLLRHVLWSNGREVDEPTADNKQCPAKNLVVLLCRVYLVEFFLHYDTFAFDWKPLVLGPTVTIKSLTKTSTF	482

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g00677	482	PANTHER	CYTOCHROME P450 26	8	471	-	-
	Aip03g00677	482	SUPERFAMILY	Cytochrome P450	12	462	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g00677	482	PANTHER	FATTY ACID HYDROPEROXIDE LYASE	8	471	-	-
	Aip03g00677	482	Gene3D	Cytochrome P450	8	481	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g00677	482	PRINTS	E-class P450 group IV signature	388	406	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g00677	482	PRINTS	E-class P450 group IV signature	372	386	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g00677	482	PRINTS	E-class P450 group IV signature	335	351	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aip03g00677	482	Pfam	Cytochrome P450	310	406	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g00677	Aip-Chr3	6619247	6621436	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip03g00677	9	480	Cytochrome P450	AT5G42650	47.992	4.19e-161	464

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g00677	K01723		-	gmx:100810890	791.186

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip03g00677	03	6619247	6621436	Aip03g00677	03	6619247	6621436	ECH