Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00652 ATGTCAGACTCGTCAAATGACTCTGGCTCTCGGAAATTTGAGAATCGGAAACATTTGAAAGCCAAATCACCTTGTGTTGATAGGGGATCAAAAATTATTGTCAAAGCTGCCTACAAAGAAGATATGATCCGTTTCAAGTTTGATCCTGCAGCTGGTTGTCTCCAGCTCTATGAACAAGTTGCAACAAGATTTAAATTACAAATCGGATCATTCCAGCTGAAGTATCTCGACGATGAAGAGGAATGGGTTTGGATGGTAAATGACTCAGATTTGGAAGAATGCATAGAAATATTGGATGATCTTGGCACCCGTTCTGTGAAATTTCTTGTTCGCGACATGCTTAGTGGAAATCTTTGA 357 0.3978 MSDSSNDSGSRKFENRKHLKAKSPCVDRGSKIIVKAAYKEDMIRFKFDPAAGCLQLYEQVATRFKLQIGSFQLKYLDDEEEWVWMVNDSDLEECIEILDDLGTRSVKFLVRDMLSGNL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00652 118 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 6 113 - -
Aip03g00652 118 MobiDBLite consensus disorder prediction 9 23 - -
Aip03g00652 118 Gene3D - 28 111 - -
Aip03g00652 118 PANTHER PROTEIN NLP8 6 113 IPR045012 GO:0003700
Aip03g00652 118 ProSiteProfiles PB1 domain profile. 31 113 IPR000270 GO:0005515
Aip03g00652 118 SMART PB1_new 31 113 IPR000270 GO:0005515
Aip03g00652 118 MobiDBLite consensus disorder prediction 1 23 - -
Aip03g00652 118 Pfam PB1 domain 34 112 IPR000270 GO:0005515
Aip03g00652 118 SUPERFAMILY CAD & PB1 domains 25 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00652 Aip-Chr3 6352987 6353343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00652 30 113 NLP Transcription Factor Family AT2G43500 67.857 5.14e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00652 - - ahf:112736800 240.736