Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00649 ATGATGACTAGCAGCTCTTTAAACTCAGATGATCCTTGTTTTGATGGTGATGGAAAATGGGCCACCAAGCTTCTTAGGGAGTGTGCTAGAGCAATCAATGATAGAGACTCAAGCAAAATCCAACACCTTCTATGGATGCTAAATGAGTTAGCTTCCCCTTATGGAGATTCTCAGCAGAAACTAGCCTCATATTTTCTTCAAGCTCTATTCTGCAAGGCCACTCAAACAGGCCAAAGATTCTACATGAATCTAAAATCAGCATCTGAAAAGAACCAATCTTTTGATTCAGCAAGAAAAATGATACTCAAATTTCAAGAGGTAAGTCCATGGACAACTTTTGGACATGTAGCTTCAAATGGTGCAATCTTGGAAGCCTTTTTAGAAGCAGGAGGAGAGAAAAACAAAAAGAAAAAGCTTCACATCATTGACATAAGCAACAACACTAGCACATTTTGCACTCAATGGCCTACTTTCTTGGAATCCTTGGCTACTAAGAGTAGTGATCATGTTGAAACTCCTCAATTGAAGCTGACAATTGTGTTGGTGAAAGAGAGCTTAAAAGGGTCAGTGATGAATGAAATTTGTCAGAGAATGGAGAAGTTTGCAAGGCTAATGAGAGTGCCCTTTGAGATTAACATGATAAATGGTGTGGAACATTTATGGAAGGTAACAAAAGAAGAGTTAGGAATAGTAGTTGAAGAAGAAGATAATGATGATGATGATGAGGTTTTTATTGCTGTGAACTGTGTTGGGGGATTGAGGAGAGTTGAGGAGGGAGAAAGGGGTAATGTAATTGGAATTTTGAAGTCTCTTAGTCCAAGAATTGTGACAATTGTTGAGGAAGAAAGTGGTGGTAGTGATGATTCTTGCATCACAAGAAATGATGATGATGACTTTGTAAAATGCTTTGAAGAGTGTTTAAGGTTTTACAAGATTTACTTTGAGATGTTAGAGGAGAGTTTTCCAACAATAAGCAATGAAAAGTTAATGCTAGAGAGGGAGTGTTCAAGAAACATACTTGTTGATTTGGGTTGCAATAATAATAATAATAATGATAGTGATCATAATAAAAGGGAGAGAGGAGTAGAGTGGTCTATGAGGTTTAGGGAGTATTTTACTCCAATAGGTTTGAGTGATGATGTTGTGGATGATGTTAGGGCATTGCTAAAGAGATATAATAGGTCAGGGTGGTCATTGATGTTGCCATCATCAAAAGTAGAAGGAATTTACTTGAAATGGAGGGATCAACCTGTTCTTTGGGCTTCAGCTTGGAAACCCTAG 1281 0.3778 MMTSSSLNSDDPCFDGDGKWATKLLRECARAINDRDSSKIQHLLWMLNELASPYGDSQQKLASYFLQALFCKATQTGQRFYMNLKSASEKNQSFDSARKMILKFQEVSPWTTFGHVASNGAILEAFLEAGGEKNKKKKLHIIDISNNTSTFCTQWPTFLESLATKSSDHVETPQLKLTIVLVKESLKGSVMNEICQRMEKFARLMRVPFEINMINGVEHLWKVTKEELGIVVEEEDNDDDDEVFIAVNCVGGLRRVEEGERGNVIGILKSLSPRIVTIVEEESGGSDDSCITRNDDDDFVKCFEECLRFYKIYFEMLEESFPTISNEKLMLERECSRNILVDLGCNNNNNNDSDHNKRERGVEWSMRFREYFTPIGLSDDVVDDVRALLKRYNRSGWSLMLPSSKVEGIYLKWRDQPVLWASAWKP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00649 426 Pfam GRAS domain family 22 425 IPR005202 -
Aip03g00649 426 ProSiteProfiles GRAS family profile. 12 425 IPR005202 -
Aip03g00649 426 PANTHER PROTEIN SHORT-ROOT-LIKE 5 425 - -
Aip03g00649 426 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 425 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00649 Aip-Chr3 6321888 6323168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00649 6 426 GRAS Transcription Factor Family AT4G37650 47.936 4.61e-125 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip03g00649 GRAS 1.2e-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00649 - - adu:107477059 801.586