Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00639 ATGGATAAGGACAAATCCCCTGGTCATGGTGGAGGTTTTCCTCCTTCTTCTGGCCGTTTTTCGGGATTCTCAGCCTCCGCAGCCCCTTTTAATGTGAAATCAGAGTTACCATCTTCATCAGCATTGCTTCCTCCTCTGCCAGTTCCGGCTGCAACCTCGGACTCTGCTAGTTTTAGTCATGACATTAGCAGAATGCCTGATAACCCTCCGAGAAATCGAGGCCATAGGCGTGCTCATTCCGAGATTCTCACTTTGCCGGATGATATTAGCTTTGAAAATGACCTTGGCATAGTTGGAGGATGTGCTGATGGGCCCTCATTCTCCGATGACACTGAGGAAGACCTACTGTCCATGTACCTTGATATGGATAAATTCAATTTGCCGGCCGCTACAGGCGAGTTTGGAATTGGGGAGACTTCAATTGGTGGTGCAGCAACAGCAGCAGCAGTAGCATTGAGTTCAGCATTGGCATCAGGAGCCGCTGCCGCCTCTTCAGAAGACAACACTGCTGTTGGGACTAATGGAAGGCCTAGAGTGAGGCACCAGCATAGCCAGTCCATGGATGGATCCACAACCATCAAACCTGAGATTTTAGTCTCTGGCTTGGAAGAGGCCTCAGCAGTTGATTCCAAGAAGGCTATTTCGGCTGCCAAGCTTGCCGAGCTTGCCTTAATTGATCCAAAGCGTGCCAAGAGGATATGGGCAAATAGACAGTCTGCTGCTAGGTCAAAAGAAAGGAAGATGCGCTACATCGCCGAGCTTGAAAAGAGGGTACAGACATTGCAAACAGAAGCAACATCCTTGTCGGCACAATTAACTATCTTGCAGAGGGATACAGGTGGACTGAATGCCGAAAACAATGAGCTGAAAGTGCGGGTGCAATCGATGGAGCAACAAGTTCACTTGCAAGATGCGCTTAACGATGCATTAAAAGAGGAAATTCAGCATTTGAGAGTCCTTACCGGACAAGCTTTGCCAAATGGAGGAGCACCTATGAACTTTGCTTCATCAGTTGGAGGAGAACAACAATTCCAATCCAAAAATCAGTCCATGCACACCATTTTAGCTGCCCAGCAGTTACAACAACTCCAAATTCGCTCGCGGAAGCAACAGCATCAACAGCAGCTATTCCAGAACCATCAACCTCAGCATCTGCAGCAATTTCAGCAGCCACAACCACCACAGCAACAACAGGAACATTAG 1203 0.4821 MDKDKSPGHGGGFPPSSGRFSGFSASAAPFNVKSELPSSSALLPPLPVPAATSDSASFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFENDLGIVGGCADGPSFSDDTEEDLLSMYLDMDKFNLPAATGEFGIGETSIGGAATAAAVALSSALASGAAAASSEDNTAVGTNGRPRVRHQHSQSMDGSTTIKPEILVSGLEEASAVDSKKAISAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELEKRVQTLQTEATSLSAQLTILQRDTGGLNAENNELKVRVQSMEQQVHLQDALNDALKEEIQHLRVLTGQALPNGGAPMNFASSVGGEQQFQSKNQSMHTILAAQQLQQLQIRSRKQQHQQQLFQNHQPQHLQQFQQPQPPQQQQEH 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00639 400 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 226 289 IPR004827 GO:0003700|GO:0006355
Aip03g00639 400 MobiDBLite consensus disorder prediction 1 20 - -
Aip03g00639 400 MobiDBLite consensus disorder prediction 365 400 - -
Aip03g00639 400 Coils Coil 244 278 - -
Aip03g00639 400 CDD bZIP_plant_RF2 229 278 IPR044759 GO:0003700|GO:0006355
Aip03g00639 400 SUPERFAMILY Leucine zipper domain 228 278 IPR046347 GO:0003700|GO:0006355
Aip03g00639 400 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 385 - -
Aip03g00639 400 SMART brlzneu 224 288 IPR004827 GO:0003700|GO:0006355
Aip03g00639 400 Gene3D - 227 279 - -
Aip03g00639 400 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 385 - -
Aip03g00639 400 MobiDBLite consensus disorder prediction 34 77 - -
Aip03g00639 400 Coils Coil 293 313 - -
Aip03g00639 400 MobiDBLite consensus disorder prediction 163 190 - -
Aip03g00639 400 Pfam bZIP transcription factor 228 277 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00639 Aip-Chr3 6239534 6242375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00639 19 357 bZIP Transcription Factor Family AT1G06070 67.059 2.66e-152 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip03g00639 bZIP_1 3.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00639 - - adu:107476759 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00308 08 2325483 2328621 Aip03g00639 03 6239534 6242375 PCT