Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00634 ATGAAAATTCAGTGTGATGTGTGTGAGAAAGTTCCAGCAACAGTGATCTGTTGTGCAGATGAAGCAGCTCTGTGTGCAAAATGTGATGTGGAGGTTCATAGTGCTAACAAGCTTGCAAGCAAACACCAGAGGCTTCTCCTTCAATGTCTCTCTAACAAGCTTCCAAGATGTGATATTTGCCAAGATAAGCCAGCTTTCATATTCTGTGTCGAAGACAGAGCACTCTTCTGTAAGGATTGCGACGAACCAATTCATTTAGCTGGCAGCCTTTCTGCGAACCACCAGCGGTTTCTCGCTACTGGAATCCGGGTGGCTTTGGGTTCTAATGACTGCTCCAAAAGTGATGAGAAAAGCCACTTGGAACCATCTAATCCAGCTGCGCAACAAGTTCCAAGGAAAGTTCCTTCTCAGCAATCGCCTAGCTTCACTCCCCCTAGCTTTTGGGCAGTTGATCAACTATTGGATTTACCAGAGTTTGGATCACCAGAGAAAAAACAAGCAGACGAATTTGGAGAGTTGGAATGGCTAGCAGATGTTGGTATCTTTGGTGAACAGTTTCCTCAGGAAACATTAGCTGCAGCTGAAGTTCCTCAGCTTCCTGTGTCGCACACTAGCACTCTTGCACCATACACTTTTAAAGCCACTAATAAATCTTACATGTCTAGCAAAAAGCCTAGGATCGAAGTCTTAGGTGAAATAGACGATGAGCATTTCACTGTGCCTGATCTAGGCTAA 735 0.4463 MKIQCDVCEKVPATVICCADEAALCAKCDVEVHSANKLASKHQRLLLQCLSNKLPRCDICQDKPAFIFCVEDRALFCKDCDEPIHLAGSLSANHQRFLATGIRVALGSNDCSKSDEKSHLEPSNPAAQQVPRKVPSQQSPSFTPPSFWAVDQLLDLPEFGSPEKKQADEFGELEWLADVGIFGEQFPQETLAAAEVPQLPVSHTSTLAPYTFKATNKSYMSSKKPRIEVLGEIDDEHFTVPDLG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00634 244 CDD Bbox1_BBX-like 57 98 - -
Aip03g00634 244 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Aip03g00634 244 MobiDBLite consensus disorder prediction 121 141 - -
Aip03g00634 244 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 244 - -
Aip03g00634 244 SMART bboxneu5 4 47 IPR000315 GO:0008270
Aip03g00634 244 SMART bboxneu5 52 99 IPR000315 GO:0008270
Aip03g00634 244 MobiDBLite consensus disorder prediction 113 141 - -
Aip03g00634 244 CDD Bbox1_BBX-like 5 47 - -
Aip03g00634 244 Pfam B-box zinc finger 52 94 IPR000315 GO:0008270
Aip03g00634 244 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aip03g00634 244 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 244 - -
Aip03g00634 244 Gene3D Classic Zinc Finger 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00634 Aip-Chr3 6185285 6188096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00634 1 164 Orphan Transcription Factor Family AT1G06040 66.071 5.36e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Aip03g00634 zf-B_box 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00634 - - gmx:100779183 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00315 08 2358815 2360369 Aip03g00634 03 6185285 6188096 PCT