Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00630 ATGCCTCGCATTCCCCCAATTCTATTCCTTTTTTACTTCGCTGTGTTCACTTTGCAGCTCTTAACACAAGCGGTATCACGTTCGGTTTTCTACGTTAATCTAATTCTGATGGAGGTTGAGATTGATGGCTCTAATAATGGGGAGGCAATAGAAAATGCTGCCATGGCTGACGATTGTAGCACCGATGAAGGAAACAACGCAGATGAAGCAAACAATGCTGATGAAGGGAACAACGCTGACGAAGGAAACAATGGTGATGATGGAAATAACATCGATGGACGTGCTATTGTGCCAGTTCAAAGCCAAGGTCAAGATGTGACTCAAGTTTCTGCTGGAGGGGCCATAACCCTAGCTGTTCCCACACTTCCGGTCCCAATTGTTTCACCTGTTGAACCTTATGTGGGACAGGAGTTTGAGTCAGAAGCAGAAGCACATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATCGTACGTGTTAGTAAACTCTCTCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGACAAGCGTGAAAATGTTATACGGCAAAGGGCTGAGACAAGGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAGTAAAATCTGGTAGCTGGGTTGTTACACGTTTTGTAAAGGAACACACACATCCTCTTGCTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATCCGGGCGAACGGGATAGAATTCGGGAATTAAATCAGCAGTTGACAGCAGAGAAAAAGAGGTCTGCCACCTATAAAAGACATCTTGAATTGATACTCGAGCACATTGACGAGTATAACGAGAGCCTATCGAAGAAAATACAGCACATAGTAGACAATGTAAAGGAGATGGAAAGCAAAGAAGAACAAAGTCAATTGAACTTTCAATTAGCCACCCTTTAA 960 0.4365 MPRIPPILFLFYFAVFTLQLLTQAVSRSVFYVNLILMEVEIDGSNNGEAIENAAMADDCSTDEGNNADEANNADEGNNADEGNNGDDGNNIDGRAIVPVQSQGQDVTQVSAGGAITLAVPTLPVPIVSPVEPYVGQEFESEAEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGRIFVCNKEGYRMTDKRENVIRQRAETRVGCKAMIMVRKVKSGSWVVTRFVKEHTHPLAGPGGGRRDFIYEQYPGERDRIRELNQQLTAEKKRSATYKRHLELILEHIDEYNESLSKKIQHIVDNVKEMESKEEQSQLNFQLATL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00630 319 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 70 309 - -
Aip03g00630 319 MobiDBLite consensus disorder prediction 65 85 - -
Aip03g00630 319 MobiDBLite consensus disorder prediction 58 94 - -
Aip03g00630 319 Pfam FAR1 DNA-binding domain 147 232 IPR004330 -
Aip03g00630 319 Coils Coil 286 306 - -
Aip03g00630 319 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 70 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00630 Aip-Chr3 6168369 6170708 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g00630 FAR1 4e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00630 - - adu:107476765 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00319 08 2390761 2392435 Aip03g00630 03 6168369 6170708 PCT