Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00627 ATGGGGTTCTCAGTGAGAGACTTGTTAATCTATGGTTTGAACATGCAACTGTGGTTATTTTTTCATGTGATGGTTCTATCATACTTGTGGTCACAAGTTACAAGTCTTGGATCCATGTCTTCCATTGCAATATCTTATGGAGAACAAGGTTCAGTCTTTTGTGGTTTGAAGCTTGATGGGTCCCATACTGTTACCTGTTATGGATCCAACACAGCCATAATCTATGAAACACCATCTCATTTCTCATTCATTGGTCTAACTGCTGGTGATGGCTTTATATGTGGACTTTTAATGGATTCAAACCAACCCTATTGTTGGGGTAGCAGTGGCTACATTGAAATGGGGGTGCCTCAACCAATGATCAAGGAAGCTGAATACATAGACATCAGTGCTGGTGATCACCATGTATGTGGATTGAGGAAGCCATTAACTGGAAGATTCAGGAACACTTCATTTGTTGATTGTTGGGGTTACAACATGACTAGGAGCTATGTGTTTGATGGAATGTTTCAGTCAATTTCAGCAGGTTCTGGATTCAACTGTGGCCTTTTCTCTCAGAATAGGAGTGTGTTCTGCTGGGGTGATGAGACTAGTAGCAGGGTCATTACTTTGATTCCAGATGACAAAAGATTCCAGAGAATCTCAGCTGGTGGATACCATGTTTGTGGAATATTGGAAGGTGTGAAGAATTCAAGAGCTGTTTGTTGGGGAAGAAGCTTGGATATAGAAGAAGAAATCTCAGTTTCAGTGAAACAACATGCTGGTAGTTATGGTCAAGGTAATGTTGATTTGGCACCAAGTGATCCAATGCTATCTGTTGTTGGAGGAAAGTTTCACGCATGTGGAATCAAAAGCTATGATAGGGAAGTGATTTGTTGGGGATTCATCATCAAACCAAGCACACCACCACCAAGTGGAACCAAGGTGTTTGAGATTGCTGGTGGTGATTACTTTTCTTGTGGTGTTCTTGCTGAAAGATCTCTTATGCCTGTTTGCTGGGGTGTTGGTTTTCCAAAAACACTACCTTTGGCTGTTTCACCAGGAATGTGCAAGTCAAATCCATGTCCTCCTGGATTCTATGAGATTGATCTCCAAAAAGGTCTTTGCAAGTCAACAGATTCAAGAATTTGCATTCATTGCAGCAGTGGTGATTGTCCATCTGAGATGTACCAGAAGAGTTCTTGTGGTGTGAATTCTGATAGAATATGTGAATATAATTGTTCTTCATGTTTTTCATCTAAGTGCTTATCAAATTGCTCATCTTCTAATTCTGAGAAGAAGAAAAATGATGATAAGTTTTGGGCTTTGCAGTTACCAGTTGTTATTGCTGAGATTGCTTTTGCAGTGTTCTTGGTTTGTATTGTGTCGTTGACTTCAGTTTTGTATGTTAGATACAAGCTAAGAGATTGTGAGTGTTCTTCAGGAAGGTCAAAGGTGAAGAAACTCAATGGTGGTTCTAACAGCAAGAACAGGACAAATTTGGAGGAGTTCAAGATCAGGAGGGCCCAAATGTTCACCTATGAGGAGCTTGAAACTGCAACTAATGGATTCAAAGAAGAATCCATTGTTGGGAAAGGAAGCTTCTCTTGTGTGTTCAAGGGTGTTCTGAAAGATGGCACTGTTGTTGCTGTTAAGAGGGCCATAGTTTCCACAAACATGCAGAAGAATTCAAAGGAGTTTCACACAGAACTTGACTTGCTATCAAGGTTGAACCATGCACATTTGCTGAACCTATTAGGATATTGTGAAGAAGGAAACGAAAGGCTTCTTGTCTATGAGTTCATGGCCCATGGTTCCTTGCATCAACACCTTCATGGACCAAATAAGGTGTTAAAGGAGCAGCTAGATTGGATAAGGAGAGTAACAATTGCAGTCCAAGCAGCAAGAGGAATTGAGTACTTGCATGGATATGCATGTCCACCAGTGATTCACAGAGACATAAAATCATCAAACATTCTCATTGATGAAGAACACAATGCAAGAGTTGCTGATTTTGGCTTGTCATTGTTAGGCCCTGCAGACAGTGGTTCACCACTTGCTGAATTACCAGCTGGTACTCTTGGTTATCTTGATCCAGAGTACTATAGGCTTCACTACCTCACCACAAAATCTGATGTATATAGCTTTGGTGTTCTGTTATTGGAGATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATTGTTGAATGGGCAGTGCCATTGATCAAGTCAGGTGACATAGCTGCAATATTAGACCCAGTTTTGAAACCTCCTAGTGATCTTGAGGCCTTGAAAAGGATTGCAAATGTGGCATGCAAATGTGTGAGGATGAGAGGGAAAGAAAGACCTTCAATGGACAAAGTAACAACAGCATTGGAAAGAGGGTTAGCAATGCTAATGGGAAGTCCTTGCATTGAGCAACCAATTTTGCCAACTGAGGTTGTTTTGGGAAGCAATAGGTTGCACAAGAAATCATCACAAAGATCATCAAATAGATCAGCTTCTGAGACCACTGAGGTAGCAGAAACTGAGGATCAACGGATTGAGTTCAGGGCACCATCATGGATAACATTCCCAAGTGTTACATCTTCTCAGAGGAGGAAGTCTTCAGTGTCAGATGCTGATGTTGAAGGAGGGAAGAACAACAACAATAACATTAGTAATAATGCAGAAGTGAATAAGAATTTGGGAAATGTTGTTGGTGTTGGTGGTGATGGTTTGAAGAGTCTTGAGGAAGAGATTGGACCTGCTTCTCCTAGAGAGAGGTTGTTCTTGCAACATAACTTCTAA 2784 0.4091 MGFSVRDLLIYGLNMQLWLFFHVMVLSYLWSQVTSLGSMSSIAISYGEQGSVFCGLKLDGSHTVTCYGSNTAIIYETPSHFSFIGLTAGDGFICGLLMDSNQPYCWGSSGYIEMGVPQPMIKEAEYIDISAGDHHVCGLRKPLTGRFRNTSFVDCWGYNMTRSYVFDGMFQSISAGSGFNCGLFSQNRSVFCWGDETSSRVITLIPDDKRFQRISAGGYHVCGILEGVKNSRAVCWGRSLDIEEEISVSVKQHAGSYGQGNVDLAPSDPMLSVVGGKFHACGIKSYDREVICWGFIIKPSTPPPSGTKVFEIAGGDYFSCGVLAERSLMPVCWGVGFPKTLPLAVSPGMCKSNPCPPGFYEIDLQKGLCKSTDSRICIHCSSGDCPSEMYQKSSCGVNSDRICEYNCSSCFSSKCLSNCSSSNSEKKKNDDKFWALQLPVVIAEIAFAVFLVCIVSLTSVLYVRYKLRDCECSSGRSKVKKLNGGSNSKNRTNLEEFKIRRAQMFTYEELETATNGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSTNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGNERLLVYEFMAHGSLHQHLHGPNKVLKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDIAAILDPVLKPPSDLEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAMLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSASETTEVAETEDQRIEFRAPSWITFPSVTSSQRRKSSVSDADVEGGKNNNNNISNNAEVNKNLGNVVGVGGDGLKSLEEEIGPASPRERLFLQHNF 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00627 927 MobiDBLite consensus disorder prediction 819 844 - -
Aip03g00627 927 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 354 403 IPR001368 GO:0005515
Aip03g00627 927 Gene3D - 75 347 IPR009091 -
Aip03g00627 927 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 19 927 - -
Aip03g00627 927 SUPERFAMILY RCC1/BLIP-II 34 295 IPR009091 -
Aip03g00627 927 Pfam Protein kinase domain 517 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00627 927 SMART serkin_6 517 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00627 927 MobiDBLite consensus disorder prediction 859 889 - -
Aip03g00627 927 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Aip03g00627 927 MobiDBLite consensus disorder prediction 819 835 - -
Aip03g00627 927 Gene3D Transferase(Phosphotransferase) domain 1 595 797 - -
Aip03g00627 927 SUPERFAMILY Protein kinase-like (PK-like) 495 790 IPR011009 -
Aip03g00627 927 ProSiteProfiles Protein kinase domain profile. 517 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00627 927 PANTHER RECEPTOR-LIKE KINASE 19 927 - -
Aip03g00627 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Aip03g00627 927 Gene3D Phosphorylase Kinase; domain 1 487 594 - -
Aip03g00627 927 SUPERFAMILY RCC1/BLIP-II 255 343 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00627 Aip-Chr3 6151965 6156162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00627 18 927 Receptor kinase-like Gene Family AT3G59420 66.522 0.0 1221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aip03g00627 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00627 - - gmx:100797455 1467.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00627 03 6151965 6156162 Aip08g00320 08 2393303 2396412 PCT