Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00622 ATGTATCCGAAACAGTCTGGCCAAGATGGCTCTGTTTCTGGTCCTGTGCGAACTAGTGATAGGATCAGGACAAGACCAAACATTTATGGCCGACCATTCATGTATTACAACACAAATCTTAGGCGGCGCAAGAAAAGCAAGAATAAGTCTAGGACAGCAGCTTCGATTGCCAAGATGCTGCGTCCAGGGAGCCGGAAGGCACAGGATTCAAATGCCAATTCTGGCTCTAGTAACCTTCGACGTTCAACTAGAAAGAGAAGGCTTAATGTAAATCTTGAAGGCTTTGCAACAGACAGCTCTGGAGCTGAGGATGAAGACTTAATGAGGCCTACATATCGACCACAATTGAGAAATCGGATCAACAATAGCATCAGCCAGGAAGAGTTGATGTCTAAGCACAAAAGAGCAGTGTCTACTAAATCAGCACCTAGACGTGAAGGTCTACGGCCTCGTCGTTCTAAGGCTGTGGCAAGAGAACAAGTAATTTCAGAATCAGATGATGGGCAAGACTTTTCAGAAGGCAAGGCAGAACAGGGTGAAACAGAAAATGGAAATGGTGAGGAAAATGATGCAGATGATGGTCAGAATGATATTGAAGGAGATGCTGAGGTGGAAGACGAAGGTGAGGATGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGCAGGATGGAAGAAGGCGCTATGATCTTAGAAATCGTTCTGATGTCCGTAGGTTTTCTATGGAAGAGGGGAAGACCCAACCAAGATCTCCTCGTAGAGTGTTACATCAAGGTATGGGAAATAAGGTTAGCAGGGATGTTAGGAAGGGTGGATCACGAGTTCATAAACGGCATCGCCTTGCAAGGGCTGAAGACTCTGATGACTCCCTCCTTGTGGATGAGCTGGACCAAGGGCCTGCCATTCCGTGGGGTCGAGGTGGCAACAGATCTGGCCCCCCCTGGCTCTTTGGGGGCTTAGATACGCATGGAACAACAGCATGGGGCTTAAACCTTGCTGCATCGGGTTGGGCCCATCAGAGTGATGCTTTGGCTACCTTGACAACTGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGGGCAGATATCCAGCCCTTACAGGTTGATGATACTGTTAGTTTTGAGGATATAGGTGGGCTCTCTGAATACATTGATGCTCTTAAAGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTCTTTGCTAGTTACCATATTACTCCTCCTAGAGGGGTGTTGCTATGTGGTCCCCCGGGAACTGGGAAAACATTAATTGCAAGAGCATTGGCTTGTGCTGCTTCAAAAGCCGGCCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCGGATGTGCTAAGCAAGTGGGTTGGTGAGGCTGAGAGACAATTGAAGCTACTCTTTGAAGAAGCACAAAGGAATCAACCTTCTATTATCTTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAACAAATTCACAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCTACCAATAGGATTGACGCTATTGATGGAGCTTTACGGCGCCCTGGTAGATTTGATCGTGAATTTAATTTTCCTTTGCCTGGTTGTGAGGCACGTGCCGAAATATTAGATATTCATACTCGCAAGTGGAAGCATCCACCTTCAAAGGATCTGAAAAGGGAACTTGCAGCTAGTTGTGTAGGTTACTGTGGTGCTGATCTAAAGGCTCTATGTACTGAAGCTGCCATTCGTGCTTTCCGTGAAAAATACCCACAGGTTTATACAAGTGATGACAAATTTCTTATAGATGTGGATTCGGTCAAGGTAGAAAAGTATCATTTTGTTGATGCAATGTCTACAATTACCCCTGCTGCTCACAGGGGAGCTATAGTGCACTCTAGGCCATTATCTCTTGTAGTTCAACCGTGTCTTCAGAGACATCTAGAAAGGGTCATGAGTATTATATCTGATATTTTCCCCCCAGTTTCTGTTGCATCAGAACTGACCAAATTTTCAATGCTTTCCTATGGATCTGCAATTCCACTTGTTTATCGACCTAGACTCCTACTTTGTGGTGGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCCGTACATTCATTAGGACTTCCATCTCTGCTATCAGATCCTAGTGCTAAGACACCAGAGGAGGCATTGGTACACATATTTGGCGAAGCTAGAAGAACCACACCATCAATTCTCTATTTACCACAATTTGATGTTTGGTGGGAAACTGCTCATGAACAACTCAGAGCTGTTCTCCTGACTTTGCTAGACGAATTGCCATCTGACATGCCTATCCTTCTACTGGGAACATCATCAGTTGTGCTTGCTGAAGTTGAAGATGTACCACATTCAGTTTTCCCTCATCGTTCAGTCTATGAAGTGAACATGCCATCTACTGAGGATAGGACCCTGTTTTTCAATCGATTAATTGAAGCTGCTATGTCAGTCTTGTTAGAAAGAATGAGTGAGAAATCCCATAATAAAGGACGCCTTCCTGAACTTCCCAAGGCACCAAAGTTGGCCACTGGTCCTAAGGTATCTGAGCTAAAAGCAAAGGTAGAAGCTGAGCAACATGCACTTCGCAGATTGCGAATGTGCCTAAGAGATGTTTGCAATCGGATATTGTATGACAAACGATTTAATGCCTTCCATTATCCAGTCTCTGATGAAGACGCACCTAATTATCGGTCAATCATACAGAACCCAATGGATATGGCTACTGTGCTGCATCATGTTGATAATGGTCATTATATCACATGTGCAAGGATTTTTATTTTGATCCTTATTCTGTTCCCAACTCAGGCTTACAATGGAGAGGACTACAATGGTGCTAGAATTGTCAGTAGAGCCTGCGAGCTGCGTGATGCGGTGCAAGGGATGATCTCACAGATGGATCCAGCACTGGTTGCATACTGTGACAAGATTGCTAGCCAAGGAGGTCCAGCCCAGTTGCCTGATGAATTAGGGGTATCCACTTTCCCTGCAACTCCTGTTGTTCAGCTGAGTGCTGCTACTAGAACAAGTGCTCGACTTCGTCATGTCCAACCGGAGGTTAATGTTGATCAGAGTTATGAAGCACTGAAGCGGACAAAGAAGACAGTTGATATTGCACATCCAGTGGCGGAGGAGAAGTCTCCAGAAGATCCTTTACCGTCTAAGCCTCCCCCGGAGCATCAGACAAATGACATGGATTCTGAAATGGTAGAACCTGTGACAATCGATGGAAATTCACATGGAACTTCTACGAGTAGCCAAGATGATGGTGGCAGAAGTCTTGAGGATGTCACAATGGTGGATGGTGAATTTTCAGGAAAAGTGGAGTCTTTAAAGGAACAATTTGTTAAGCGCAGTGAAAATTGCAGCGTTCCACAACTTGAAAGGCTTTACACAAGGATTATGAAGGGTGTGTTTGAAAGCAGAGATAAAGGTGATGATGTTAAGGCTTCGGTTTTGAAGTTTTTGTCGAAATTTGTAGAGGATGATGCAAATTTCTGA 3633 0.4454 MYPKQSGQDGSVSGPVRTSDRIRTRPNIYGRPFMYYNTNLRRRKKSKNKSRTAASIAKMLRPGSRKAQDSNANSGSSNLRRSTRKRRLNVNLEGFATDSSGAEDEDLMRPTYRPQLRNRINNSISQEELMSKHKRAVSTKSAPRREGLRPRRSKAVAREQVISESDDGQDFSEGKAEQGETENGNGEENDADDGQNDIEGDAEVEDEGEDDEDGDDEEGEEEEEEEEEEEEEEEEQDGRRRYDLRNRSDVRRFSMEEGKTQPRSPRRVLHQGMGNKVSRDVRKGGSRVHKRHRLARAEDSDDSLLVDELDQGPAIPWGRGGNRSGPPWLFGGLDTHGTTAWGLNLAASGWAHQSDALATLTTGIQTAGPSSKGGADIQPLQVDDTVSFEDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKDLKRELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVKVEKYHFVDAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLERVMSIISDIFPPVSVASELTKFSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLDELPSDMPILLLGTSSVVLAEVEDVPHSVFPHRSVYEVNMPSTEDRTLFFNRLIEAAMSVLLERMSEKSHNKGRLPELPKAPKLATGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVSDEDAPNYRSIIQNPMDMATVLHHVDNGHYITCARIFILILILFPTQAYNGEDYNGARIVSRACELRDAVQGMISQMDPALVAYCDKIASQGGPAQLPDELGVSTFPATPVVQLSAATRTSARLRHVQPEVNVDQSYEALKRTKKTVDIAHPVAEEKSPEDPLPSKPPPEHQTNDMDSEMVEPVTIDGNSHGTSTSSQDDGGRSLEDVTMVDGEFSGKVESLKEQFVKRSENCSVPQLERLYTRIMKGVFESRDKGDDVKASVLKFLSKFVEDDANF 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00622 1210 MobiDBLite consensus disorder prediction 42 244 - -
Aip03g00622 1210 PANTHER AAA DOMAIN-CONTAINING 1 1205 IPR045199 -
Aip03g00622 1210 SUPERFAMILY Bromodomain 904 1021 IPR036427 GO:0005515
Aip03g00622 1210 Gene3D - 898 1025 IPR036427 GO:0005515
Aip03g00622 1210 ProSitePatterns AAA-protein family signature. 531 549 IPR003960 GO:0005524|GO:0016887
Aip03g00622 1210 Gene3D - 384 654 IPR027417 -
Aip03g00622 1210 Coils Coil 214 241 - -
Aip03g00622 1210 ProSiteProfiles Bromodomain profile. 929 971 IPR001487 GO:0005515
Aip03g00622 1210 MobiDBLite consensus disorder prediction 1120 1136 - -
Aip03g00622 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 650 IPR027417 -
Aip03g00622 1210 Pfam Bromodomain 919 965 IPR001487 GO:0005515
Aip03g00622 1210 MobiDBLite consensus disorder prediction 277 296 - -
Aip03g00622 1210 Pfam AAA+ lid domain 589 625 IPR041569 -
Aip03g00622 1210 PANTHER BNAC08G44480D PROTEIN 1 1205 - -
Aip03g00622 1210 SMART bromo_6 906 1012 IPR001487 GO:0005515
Aip03g00622 1210 Pfam ATPase family associated with various cellular activities (AAA) 426 561 IPR003959 GO:0005524|GO:0016887
Aip03g00622 1210 MobiDBLite consensus disorder prediction 1 30 - -
Aip03g00622 1210 Gene3D - 695 855 IPR027417 -
Aip03g00622 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 710 925 IPR027417 -
Aip03g00622 1210 MobiDBLite consensus disorder prediction 1 20 - -
Aip03g00622 1210 MobiDBLite consensus disorder prediction 128 182 - -
Aip03g00622 1210 MobiDBLite consensus disorder prediction 1086 1138 - -
Aip03g00622 1210 CDD AAA 706 844 - -
Aip03g00622 1210 CDD AAA 422 561 - -
Aip03g00622 1210 Gene3D - 562 647 - -
Aip03g00622 1210 MobiDBLite consensus disorder prediction 183 236 - -
Aip03g00622 1210 SMART AAA_5 422 563 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00622 Aip-Chr3 6094993 6101931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00622 372 626 Calmodulin-binding Proteins AT3G56690 36.680 2.03e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00622 K22531 - gmx:100787765 1903.64