Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00609 ATGGATCCTAAAGTACCAATAGAGGACCAATTTTCCAAGTTGCACCCTTCCTTCCCAGAAGGCATAAGAATTGGAATAGTTGGTGGTGGTCCAAGTGGCTTATCAGCAGCTTATGCACTTGCCAGGCTTGGTTACAAGAATGTCACAGTCTTGGAGAAGCATCACACAGTTGGTGGCATGTGTGAATCAGTAGACATTGAAGGAAAAGTATATGATCTAGGTGGGCAAGTTCTTGCTGCAAGCAGTGCTCCAATCATTTTTCACTTGGCAAAAGAGACAGGCTCAGCACTAGAAGAATTAGACTCTCACAAGCTTGCTATTATCAACCCTTCCAATGGAGAATATCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGGAAATTCAGGAAAAGGTGAAGAATTCTGGTAGAATTGGGGTGCATGGAGTGAGTGACATTGCTCCAGAGTTGGCTCCAGAATATCTTGAATGTCATGGACTCAAATCTGTTCCTAAATCTGTGGCTTATGGCTACACTGCCTCAGGATATGGCTTTGTTCAAGATATTCCTTATGCATACCTTCATGAGTTCACTAGAACCTCCATGGCTGGAAAAATCCGAAGGTTTCGAGACGGATATACAAGTCTTTGGCAGAAGATTGCTCAATCACTTCCTTTGAAACTTTGCTGCAACACTGAAGTATTGACACTTAGAAGGAACTCTGATGGTGTCACAGTTAATGTCAAGAACTTAAATGGAGTTGAAACTTTGGTATTTGATAAGATCATAATCTCTGGTTCATTTCCATTGAAATATGGAAGAACTTATAGATCATTGCCTTCAACTTGCACAGATTGTGAACCTGAAGTAATGGATACAAGTGATCTTGAAAAAGATTTGTTCAGCAAAGTAGAAACAAATGACTACTACACTACTGTTTTGAAGATTAACAGACTTGATCATTTGCCTGTTGGATTTTATTATTTCAATGAATACATGGAAGATCCTAGCACAATTGGACATCCGGTTGCAATTCAAAAATTTTATGCAGACACTAACATATTCTTGCTTTGGTCCTATGGCAACTCTACTGATATTAAAGGACCTGCCGTCACAAAGCTTGCAATCAAGACAGTAGAATCCATGGGGGGAGAGGTTCAGAAAGTCGTTCTTCAACGGCGCTTTAAGTATTTTCCTCATGTTAGTAGCCAAGCTATGAAAGATGGATTCTATGAAAAGTTGGAATCAGGACTTCAAGGTTCAAGGAATACTTACTATGTAGGTGGCCTTATGGCATTTGAGCTTACAGAGAGGAATTCATCTTATGCCATGGCTTTAATATGCAAGAACTTTGCAAATAGCAGTGATTTGCCAATGTATCCTTATACTAAGAGTTTGTTTCCATTGAGAACTGAGTGCCAAGAAATGGATCCTAAAGAGTTAAGTGAATTGCCAGGAGTGCATTTTCCTAATTTGCCTACTTTGGATGGCTATTTAAGGCAATGGGGAACTCATCCTATCACTCAAGACAGAACACTTTACACTTGGATTAATGAAGAAGGCGCACCGGTAGGCCAGAGGACTTATGCAGAACAACATCTTAATGCATCCTGCATTGCTCATAAGCTCTTAACATGCCAAAAGCCGGTTATCAAGCCTGGGGACAAGGTTCTTCTTGTTTATGTGCCTGGTCTAGACTTCATCGACGCCTTCTTTGGATGCCTAAGAGCTAGAGTCATACCAGTTCCAGTTCTTCCTCCGGATCCAATGCAAAGAAGTGGACAAGCACTAACAAAAATTGAAAACATTGCCAAGTCCTGCAGCATTGTGGCAATTTTGTCAACAGCTGCTTATCACTCGGCCGTCCGGGCAGGTTCATTGAAAAATTTTATCTCATTAACTGGGAAAAGTGGGAAGTCCTCAGCTCGCTGGCCGAATCTTCCATGGCTGCACACTGATACTTGGGTCAAGAATTCAAAAAGTTTGGCCTTGAATGGTCTAGATGATCAATGTGAAGAAGCTCAGCCTGGTGATATTTGTTTCTTGCAATTCACGTCTGGTTCGACCGGTGATGCTAAAGGAGTTATGATCACTCATGGTGGCCTTATTCACAATGTGAAGTTAATGAGAAGTAGATACAGGAGCACATCAAGAACAGTCCTAGTGAGTTGGCTCCCTCAGTATCATGACATGGGACTGATTGGGGGACTTTTTACATCTCTTGTCAGTGGTGGATCGGCGATTTTGTTTTCGCCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATGAGCAAATATCAAGCAACTCACAGTGCTGGCCCAAACTTTGCATTTGAGTTGGTGATTAGAAGGTTATTCGGGGAACGAAAGCCTATCATTGTTGATTGGCAAGGAAGAGTTTGTTGTGGATATACTCAGCAAGAGAATGAAGATATTGACATAAGAATAGTTGATCCGGAGACATGTGAAGAGCTTCAAGAGGATGGAAAGGAGGGAGAGATTTGGTTTAGTAGCCCAAGTGCTGGAATAGGATACTGGGGAAGGGAAGAATTGAGTCAGAATACTTTCAAGAACAAACTTCGCAATCATCCTGGCCGTTACTACACAAAAACAGGAGACTTGGGAAGAATCATAGATGGAAAACTGTTCATCACTGGAAGAATCAAAGATCTCATCATTGTTGCTGGAAGGAACATCTACTCTGCAGATGTTGAGAAGACAGTTGAGACTTCCTCAGAATTGCTTCGGCCTGGTTGTTGTGCTGTCATTGGTGTCCCGGAGGAAATCTTATCTGCAAAGGGGATTTCCATGCCAGATGGCTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAGGTTAGAGATGGAAAACCAGTTGGCAAAGATGTTATTGAGAAGATTCGGACTCGTGTGGTTGAAGAACATGGAGTTGGTGTTGCTTCTGTTAAGCTGGTCAGGCCTAGAACAATCAGCAAAACAACATCTGGAAAAATCAAGAGATTTGAATGTATCAAGCAGTTTGCAGATGAATCTCTGAACTTGGTTCCACAAGGTCCACAGACTCTATTGAAGAAAACTTTGCTGAGATCATATACTACCGGAACATGTGGCGAAGGGAATACTCCGAGGCCCCGGCTAGTAAGAAGAACACTTGCAGCCAGCAAAAGGATCAGTAAGAATGACATTGTGGAATTCTTGAAGGGCCTTATTTCTGAGCAAACTGGAATTCCAATCAACAACATCTCAGTTACAGATAACCTAACATCCTATGGAATTGATTCGATTGGTGTGGTTAAAGCAACTCAAAAGCTCTCGGATTTCCTTGGAACACCAGTTGCAGCCATTGATGTTTTCACTGCAACAAACATTCTAGAATTGGCAAACTTCTCTGAGGATCTGCTATCCAAGATTCAGCCTCAGCTTTCAAGCAATCCAACCAATGTTCCAGAAGCTGAAACTTTTTCTACTGAACTGGTTGAAGAGGTATCTACATCTAAGCGATTTGGTATCCATTTACTTCAAGTTATAGCACTTGTTTATATTTCCATCATGCTAGCCTCACCAGCTTATATATCCATCAATGCTTTCCTAAGCTTCATCCCAAGTTTCAGTATATCAGTAGATGGAATACCCTGGTCAAATTATTTGGTTTCCCTTGCTTTAGCACCTATTGCTTGGATTCTTTGCATTGCTGTTACTTGCATTTGCATTTCATTATTTGGAAATTCTTTCTTGAGGCCAAACTATGCTCTTGTCTCCGAAATCTCCTTGTATTCAATGGACTTTGTCAAATGGTGGGCATTATATAAGGTCCAAGAGATTTCTTCTAAAGTTCTAGCAGTTCACCTCAGAGGAACTGTGTTTTTGAAGTACTGGTTTGAGATGCTTGGTGCAAGGATTGGATCCTCAGTGTTGCTTGATACAGTTGACATTACCGATCCGAGTCTTGTTTCGATTGGAGATGAAGCTGTCATTGCAGAAGGTGTTTTGGTTCAAAGTCATGAGGTAAAAAGCAGAATTCTAAGTCTCCGTGCTATCAAGATTGGCAGAAGTTCCTCAATTGGACCTTATGCAGTTATTCAAAAAGGAAGTGTTATTGAAGAAGGTGCTGAGGTACAGGCCTTGCAAAAGGTTGAAGGAGGCCAGCCTGTGCTCAAATCTGCTAAGCTTAGTGATGTTGATAAGAATGCAGAAGTTCCTAGCTTTTACCACTTTATTGGGATCTATCTTGTTAGCTTTCTCAGTTCACTAGCTGCAGCTATTACCTACTTCATGTATATATGGTTCTCCAAGAAATCTCCATCATTCCTACACTTTTCATTTGTTTGCCTATGTGGTGCATTCCACTGGATCCCCTTCACCATTATTGCATATGCTACCATGTTTTCTGATGTACCATCAAATCCAATAACCTTTGCCATTTCATTTGCCGGCGCCTACTTACTTCATGGTCTTGTGCTCATAGCTCTCAGCAGCGCTTTCTCCCATCTCCTCATCATGTCCGGTATAAAGCAAAACCAATACAGAACTTGGCTTAAGCAACAAGTCACCATGTCATGCCACCTTAGATTCGCGAAGCTTCTCTCAGGAACAGGAGCCTTCTGTATTTATCTACGACTCTTGGGTGCGAAAATTGGCAAGCATTGTTCCATTAGAGCAATCAATCCCATTTCAAAGCCAGAATTAATGACAATCGGTGATGGTGTCCATCTAGGAGATTTCAGCAAGATAATTACTGGTTTTTACTCTTCCAGTGGATATACTTCTGGAAAAGTTGAAGTTCGGCATAATTCAGTTGTTGGCAGTCAAAGCCTAATTCTCCCAGGTTCTATTGTCCAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGTACTCTATACTCCAAGAGGGTGGTGTTTATATTGGATCACAATCCCAACCAGTTATCAGAAACACAATGAATAATTCTGATAAAAATATAGAAGAGATGGACACTGAATGTAACGAGAATGCTAACAATTTGGCGACAACATTGCATAAAAAGGACTCAGATAAAGTTACCTTGACCAGAACATGGTATCAAAGTTTCTCAGTACTCTTCATTCAACCCTTGATGCAAACATTTTTGCCTTATTTTGTGGTTGGTTTATCAGTTTTTGCACCTTTGGACCTTATTGTTCACAAAAAGAATGCCATGAATCTCTCGTTGCATTGGTTTTTCCCTATGGTTTGGGTTCTCTCTGGCACTCTAGCTGCATTGGCATGTGTTATAGCCAAAAGGGTTCTTGTAGGAAAGAACAAATCTGGAGAAAAAGTTCCCATATGGAGCACAAGGATCACCATGGACAGCACTTGGCAAGCCATAAGAACACTTGTTGGAGACTTTTTCATGGACATGACAAATGGCTCATATTTTCTTGTGTTGTATATGAAGCTGATGGGTGCAGATGTTGAAACGGATCACGAAGTTTATGTGGATAGCAATGGAGCATTGTTGAATCCTGAAATGGTGAAGATTGAAAGAGGTGGCTGTGTGGGAAAAGAAGCATTGCTGTTTGGACACATATATGAAGGGGAAGAAGGAGGAATGGTGAAGTTTGGAGATATCAAAATTGGAGAAGATGGTTTTGTTGGTAGCAGGGCTGTTGCCATGCCTGGTGTGCAGTTGGAGAATGAGGGAAATCTTGGTGCTCTATCTCTTGCCATGAAAGAAGAGATCATAAGGTCAAGGTGA 5724 0.4114 MDPKVPIEDQFSKLHPSFPEGIRIGIVGGGPSGLSAAYALARLGYKNVTVLEKHHTVGGMCESVDIEGKVYDLGGQVLAASSAPIIFHLAKETGSALEELDSHKLAIINPSNGEYQDIKVADDYVSVMSLTLEIQEKVKNSGRIGVHGVSDIAPELAPEYLECHGLKSVPKSVAYGYTASGYGFVQDIPYAYLHEFTRTSMAGKIRRFRDGYTSLWQKIAQSLPLKLCCNTEVLTLRRNSDGVTVNVKNLNGVETLVFDKIIISGSFPLKYGRTYRSLPSTCTDCEPEVMDTSDLEKDLFSKVETNDYYTTVLKINRLDHLPVGFYYFNEYMEDPSTIGHPVAIQKFYADTNIFLLWSYGNSTDIKGPAVTKLAIKTVESMGGEVQKVVLQRRFKYFPHVSSQAMKDGFYEKLESGLQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANSSDLPMYPYTKSLFPLRTECQEMDPKELSELPGVHFPNLPTLDGYLRQWGTHPITQDRTLYTWINEEGAPVGQRTYAEQHLNASCIAHKLLTCQKPVIKPGDKVLLVYVPGLDFIDAFFGCLRARVIPVPVLPPDPMQRSGQALTKIENIAKSCSIVAILSTAAYHSAVRAGSLKNFISLTGKSGKSSARWPNLPWLHTDTWVKNSKSLALNGLDDQCEEAQPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMRSRYRSTSRTVLVSWLPQYHDMGLIGGLFTSLVSGGSAILFSPMTFIKKPLLWLETMSKYQATHSAGPNFAFELVIRRLFGERKPIIVDWQGRVCCGYTQQENEDIDIRIVDPETCEELQEDGKEGEIWFSSPSAGIGYWGREELSQNTFKNKLRNHPGRYYTKTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVETSSELLRPGCCAVIGVPEEILSAKGISMPDGSDQVGLVVIAEVRDGKPVGKDVIEKIRTRVVEEHGVGVASVKLVRPRTISKTTSGKIKRFECIKQFADESLNLVPQGPQTLLKKTLLRSYTTGTCGEGNTPRPRLVRRTLAASKRISKNDIVEFLKGLISEQTGIPINNISVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTATNILELANFSEDLLSKIQPQLSSNPTNVPEAETFSTELVEEVSTSKRFGIHLLQVIALVYISIMLASPAYISINAFLSFIPSFSISVDGIPWSNYLVSLALAPIAWILCIAVTCICISLFGNSFLRPNYALVSEISLYSMDFVKWWALYKVQEISSKVLAVHLRGTVFLKYWFEMLGARIGSSVLLDTVDITDPSLVSIGDEAVIAEGVLVQSHEVKSRILSLRAIKIGRSSSIGPYAVIQKGSVIEEGAEVQALQKVEGGQPVLKSAKLSDVDKNAEVPSFYHFIGIYLVSFLSSLAAAITYFMYIWFSKKSPSFLHFSFVCLCGAFHWIPFTIIAYATMFSDVPSNPITFAISFAGAYLLHGLVLIALSSAFSHLLIMSGIKQNQYRTWLKQQVTMSCHLRFAKLLSGTGAFCIYLRLLGAKIGKHCSIRAINPISKPELMTIGDGVHLGDFSKIITGFYSSSGYTSGKVEVRHNSVVGSQSLILPGSIVQKNVILGALSVAPMYSILQEGGVYIGSQSQPVIRNTMNNSDKNIEEMDTECNENANNLATTLHKKDSDKVTLTRTWYQSFSVLFIQPLMQTFLPYFVVGLSVFAPLDLIVHKKNAMNLSLHWFFPMVWVLSGTLAALACVIAKRVLVGKNKSGEKVPIWSTRITMDSTWQAIRTLVGDFFMDMTNGSYFLVLYMKLMGADVETDHEVYVDSNGALLNPEMVKIERGGCVGKEALLFGHIYEGEEGGMVKFGDIKIGEDGFVGSRAVAMPGVQLENEGNLGALSLAMKEEIIRSR 1907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00609 1907 CDD FAAL 499 1010 IPR040097 GO:0008610
Aip03g00609 1907 PANTHER AMP-BINDING ENZYME 1671 1907 - -
Aip03g00609 1907 PANTHER AMP-BINDING ENZYME 788 1675 - -
Aip03g00609 1907 PANTHER AMP-BINDING ENZYME 1 787 - -
Aip03g00609 1907 SUPERFAMILY Trimeric LpxA-like enzymes 1285 1382 IPR011004 -
Aip03g00609 1907 SUPERFAMILY Acetyl-CoA synthetase-like 493 1015 - -
Aip03g00609 1907 Gene3D - 482 890 IPR042099 -
Aip03g00609 1907 ProSitePatterns Putative AMP-binding domain signature. 681 692 IPR020845 -
Aip03g00609 1907 Pfam Flavin containing amine oxidoreductase 32 266 IPR002937 GO:0016491
Aip03g00609 1907 SMART Phosphopantetheine attachment site 1064 1135 IPR020806 GO:0031177
Aip03g00609 1907 Gene3D - 1050 1133 IPR036736 -
Aip03g00609 1907 Gene3D - 23 446 IPR036188 -
Aip03g00609 1907 Gene3D - 891 1018 IPR045851 -
Aip03g00609 1907 Pfam AMP-binding enzyme 523 785 IPR000873 -
Aip03g00609 1907 Pfam AMP-binding enzyme 813 896 IPR000873 -
Aip03g00609 1907 Gene3D Hexapeptide repeat proteins 1297 1399 - -
Aip03g00609 1907 PANTHER AMINE OXIDASE 1671 1907 - -
Aip03g00609 1907 PANTHER AMINE OXIDASE 788 1675 - -
Aip03g00609 1907 PANTHER AMINE OXIDASE 1 787 - -
Aip03g00609 1907 ProSiteProfiles Carrier protein (CP) domain profile. 1061 1135 IPR009081 -
Aip03g00609 1907 SUPERFAMILY Trimeric LpxA-like enzymes 1539 1625 IPR011004 -
Aip03g00609 1907 Pfam Phosphopantetheine attachment site 1066 1130 IPR009081 -
Aip03g00609 1907 Gene3D Hexapeptide repeat proteins 1533 1680 - -
Aip03g00609 1907 PRINTS Adrenodoxin reductase family signature 23 45 - -
Aip03g00609 1907 PRINTS Adrenodoxin reductase family signature 47 60 - -
Aip03g00609 1907 ProSitePatterns Phosphopantetheine attachment site. 1090 1105 IPR006162 -
Aip03g00609 1907 SUPERFAMILY FAD/NAD(P)-binding domain 20 271 IPR036188 -
Aip03g00609 1907 Gene3D - 303 396 - -
Aip03g00609 1907 SUPERFAMILY ACP-like 1059 1136 IPR036736 -
Aip03g00609 1907 SUPERFAMILY Trimeric LpxA-like enzymes 1740 1900 IPR011004 -
Aip03g00609 1907 Gene3D - 94 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00609 Aip-Chr3 5961197 5967832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00609 677 1006 Monolignol Biosynthesis Gene Families AT1G20480 25.389 9.54e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00609 - - adu:107477067 3591.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00609 03 5961197 5967832 Aip03g00609 03 5961197 5967832 ECH