Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00594 ATGCTGAGCTTTAGGGTGTCAATTGTTTTCACTGAACGAGGAAACGAGAGTTCCAATAAATTCAACTCTTCAACTTGCAGAAACTTACAAAGTGTTCATCACTCCAGTAAACCCTTCACTGCTGATGCAGGTAGTAGTATCTATCATTCATCAATAACAATGAACTCATCTTCAAACAATAATAACTGGCTTTCCTTCCCTCTTTCACCAACTCATCATCAAGCCACTACTCAATATCATCAATTCCCTCTTGGCTTTGTCAACGACACCATCGAAAACCCTTTCCACAATCATGATTGGAATAATGTGATAAATGGTGGTGAGAGCAGCAATAACAATGATCAAGTTCCAAAGGTAGCGGATTTCCTTGGTGTGAGGAAGGCAGAGGAAGATTCATCATCATCAGATCTTGTTGCCCTCTTCACCGGTAACAGTGTCTTGCCGTTGCAGCAAAACAACAACTATGAGGTGGAGGAGCAGCAGTTTCAAACAAATAATAATCTGCAATCACTCACATTGTCCATGGGAAGTGCTAGTAATAATAATAATAATAAGGATTCATCAACAACCAGCTGTGACAATAACAGCATTGTTGAAGCCCCACCTTCTAATAGAAGAACTCTAGATACCTTTGGCCAGAGAACTTCAATATACCGTGGCGTAACAAGACATAGATGGACTGGAAGATATGAAGCTCATCTTTGGGATAATAGCTGCAGAAGGGAAGGACAATCAAGAAAAGGTCGCCAAGGTGTGTGTGGATATGATAAAGAAGATAAAGCAGCTAGGGCTTATGATTTGGCTGCATTGAAGTATTGGGGGACATCCACTACTACCAACTTTCCTATCAGCAACTATGAGAAGGAATTGGATGAAATGAAACACATGACAAGACAAGAATTTGTAGCCGCCATAAGAAGGTTGAAAAGTAGTGGTTTCTCGAGAGGTGCATCAATGTATCGTGGAGTTACAAGgcatcatCAACATGGAAGATGGCAAGCAAGAATTGGAAGGGTCGCCGGAAACAAAGATCTTTACTTAGGAACATTTAGTACGGAGGAAGAGGCTGCAGAAGCTTATGACATAGCAGCCATAAAGTTCAGAGGCCTTAACGCCGTTACAAACTTCGACATGAGCCGTTACGACGTCAAAGCCATTCGTGAAAGCAACGCTCTCCCAATTGGAGGTGGTGCTGCTAAGAGATTGAAAGAAGCACAAGCTTTGGAATCTTCTAGAAAACGAGAACAGTTGCTTGCACTCGGAGGTGGTGCCTCTTCTTCTTCTTCTACCAGGTTCCCTTTCATGCAGCAGCATCATCAGTTCAATCAAGAGCTTCAGATTCAACCATTGTTAAACCTACAGAACCACGAGGTTTCTCATTATCAATTCATGCAGGATCCTTCTTCTTCTTCTTCTCCTTCTCCTTCTCCTTCTCCTTCATCGTTGCTTCATCACAGTTATCTGCAAACGCAGATTCAGTTACACCAACAGAATGCTCAGTTTTACAACAGCTACCTTCATGGAATGATCAACATTGGTTCTTCTCCTTCTTCTTTTTCGCTCATGGATAATAATAATAATAATAATAATAACATGCTTGGTGGTTTGGCTTCCAATAATTCTTCTTCCGAGGAACTTGCGTTGGTTAAGGTTGATTATGATATGAATCCTGGCGGTTATGGCGGTTGGCCAGGAACCACGGAGACAGCTTCGGAGTCCATGCAGGAACAAAGTGGCGGTGTTTTTACAATGTGGAATGATTAG 1764 0.4172 MLSFRVSIVFTERGNESSNKFNSSTCRNLQSVHHSSKPFTADAGSSIYHSSITMNSSSNNNNWLSFPLSPTHHQATTQYHQFPLGFVNDTIENPFHNHDWNNVINGGESSNNNDQVPKVADFLGVRKAEEDSSSSDLVALFTGNSVLPLQQNNNYEVEEQQFQTNNNLQSLTLSMGSASNNNNNKDSSTTSCDNNSIVEAPPSNRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGVCGYDKEDKAARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRLKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAIRESNALPIGGGAAKRLKEAQALESSRKREQLLALGGGASSSSSTRFPFMQQHHQFNQELQIQPLLNLQNHEVSHYQFMQDPSSSSSPSPSPSPSSLLHHSYLQTQIQLHQQNAQFYNSYLHGMINIGSSPSSFSLMDNNNNNNNNMLGGLASNNSSSEELALVKVDYDMNPGGYGGWPGTTETASESMQEQSGGVFTMWND 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00594 587 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 62 586 - -
Aip03g00594 587 PRINTS Ethylene responsive element binding protein signature 218 229 IPR001471 GO:0003700|GO:0006355
Aip03g00594 587 PRINTS Ethylene responsive element binding protein signature 359 379 IPR001471 GO:0003700|GO:0006355
Aip03g00594 587 ProSiteProfiles AP2/ERF domain profile. 217 282 IPR001471 GO:0003700|GO:0006355
Aip03g00594 587 CDD AP2 216 284 IPR001471 GO:0003700|GO:0006355
Aip03g00594 587 CDD AP2 318 379 IPR001471 GO:0003700|GO:0006355
Aip03g00594 587 MobiDBLite consensus disorder prediction 173 203 - -
Aip03g00594 587 MobiDBLite consensus disorder prediction 463 483 - -
Aip03g00594 587 SUPERFAMILY DNA-binding domain 318 379 IPR016177 GO:0003677
Aip03g00594 587 Gene3D AP2/ERF domain 217 284 IPR036955 GO:0003700|GO:0006355
Aip03g00594 587 Gene3D AP2/ERF domain 319 379 IPR036955 GO:0003700|GO:0006355
Aip03g00594 587 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 62 586 - -
Aip03g00594 587 ProSiteProfiles AP2/ERF domain profile. 319 377 IPR001471 GO:0003700|GO:0006355
Aip03g00594 587 SUPERFAMILY DNA-binding domain 216 284 IPR016177 GO:0003677
Aip03g00594 587 SMART rav1_2 217 288 IPR001471 GO:0003700|GO:0006355
Aip03g00594 587 SMART rav1_2 319 383 IPR001471 GO:0003700|GO:0006355
Aip03g00594 587 Pfam AP2 domain 320 369 IPR001471 GO:0003700|GO:0006355
Aip03g00594 587 Pfam AP2 domain 217 274 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00594 Aip-Chr3 5774355 5777919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00594 59 587 AP2-EREBP Transcription Factor Family AT3G20840 56.134 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aip03g00594 AP2 6.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00594 K09285 - gmx:100788471 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00594 03 5774355 5777919 Aip03g00594 03 5774355 5777919 ECH