Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00581 ATGGAGGAAGTTGAACAAGCTAATAGATTAGCTGTTGAAAGCTGTCATAGAGTTCTTAGTATTTTGTCTCAGCCAAGGGATCAAGTTCAGAATAGGAATTTAATGGTGGAAACTGGTGAAGCTGTGTTAAGGTTCAAGAAAGTTGTTTCTTTGCTTCACAATGGTTTGGGTCATGCAAGAGTGAGGAAGCATAGAAAGCTTCAAGTACCCTTTTCTCAAAGCATACTCTTAGATAACCCGAATTGCTTCAAGAACAACAACAACAACCTTAACCATGGTCAATCAAAGAAAGTAGTGATGCTTCATGAGAATTCAGTTCAGGAATTGGGATCAAGTACGGTTAGGAACTCACTTTCTTTGGTGAATCCATCTTTGGAATTGAGCTCAAGTGCCAAAAGTACTATTAACCAACAAGGTTCTTCATCTAGTCACTATCAGTTCCTTCAACAGCAACAAATTCAGCAACAAAGGTTGTTGATGCAGCAGCAACAGCAGCAGCAACAAATGAAAAATCATGCTGAGATGATGTTCCGAAGGAACAACAGCGGCATAAACCTCAATTTCGACAGCACTAGCTGCACGCCGACAATGTCTTCTACTACTAGGTCTTTCATTTCTTCCTTGAGCATAGACGGAAGTGTGGCGAACCTGGACGGAAGTTCCTTCCATCTTATAGGAGCTCCACTCTCTTCTGATCAAAATTCGCAACAGCATAAGCGAAAATGTTCCGCTAGAGGCGACGAGGGCAGTGTGAAATGTGGAAGCAGTGCTAGATGTCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATTAAGGTGCCAGCTATCAGCAAAAAACTTGCAGACATACCTCCTGATGATTATTCATGGAGGAAGTATGGACAGAAACCAATCAAGGGTTCTCCTCACCCAAGGGGATATTACAAGTGCAGCAGCATGAGAGGGTGCCCTGCAAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCAACAATGCTAATTGTTACCTATGAAGGAGAGCATAACCATCCAAAGTTACCAACACAATCTGCAAATGCATGA 1065 0.4235 MEEVEQANRLAVESCHRVLSILSQPRDQVQNRNLMVETGEAVLRFKKVVSLLHNGLGHARVRKHRKLQVPFSQSILLDNPNCFKNNNNNLNHGQSKKVVMLHENSVQELGSSTVRNSLSLVNPSLELSSSAKSTINQQGSSSSHYQFLQQQQIQQQRLLMQQQQQQQQMKNHAEMMFRRNNSGINLNFDSTSCTPTMSSTTRSFISSLSIDGSVANLDGSSFHLIGAPLSSDQNSQQHKRKCSARGDEGSVKCGSSARCHCSKKRKHRVKRSIKVPAISKKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSANA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00581 354 ProSiteProfiles WRKY domain profile. 281 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g00581 354 Pfam Plant zinc cluster domain 239 284 IPR018872 -
Aip03g00581 354 MobiDBLite consensus disorder prediction 228 247 - -
Aip03g00581 354 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 353 - -
Aip03g00581 354 SMART WRKY_cls 286 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g00581 354 SUPERFAMILY WRKY DNA-binding domain 284 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g00581 354 Pfam WRKY DNA -binding domain 288 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g00581 354 Gene3D WRKY domain 272 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g00581 354 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 353 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00581 Aip-Chr3 5661173 5664031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00581 1 351 WRKY Transcription Factor Family AT2G30590 57.180 3.17e-129 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip03g00581 WRKY 5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00581 - - gmx:100170681 522.316