Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00576 ATGACAGACATGTATGAAAATCAAGCATCTCCTGATGTCTCAAATTATGCATCAAGTAGTGGAATCTCTTCTGGGGATGATAATAAAGGGATTGGTTATAGAGCTGCAAAATCAAAGCATTTATATCTTTTGGGTAGCAATTCTTGGTTTCAATCCTTTCCCTTCAAAATTGATCTCAATTTTGTTCGTATGGTGATGGCAGAGGTGATTGGAACATTTATTTTGATGTTCTGTGTAAGTGGAATAATAGCAAGCACAAAATTCCAAAGTGGCGAAGTGGGGCTTCTAGAGTATGCAGCCACAGCAGGATTAACAGTGGTTGTAATCATCTTCTCCATAGGACCAATTTCTTGTGCACATGTCAACCCAGCCGTCACAATTGCCTTTGCCACAATTGGTCATGTTCCATGGTACAAGGTTCCAATTTACATAATAGCACAGATAGCAGGTTCTATATTTGCCACATTCATAGGTAGCCTTGTTTATGGCATAAAATCAGAGGTTATGATCACAAGGCCAATCCAAGGTTGCAACTCTGCATTCTGGGTTGAACTCATTGCAACTTTCATCATCATGTTCCTTGTTGCAGCTTTGACATCTGAGTATGAATCAGTTGGGCAATTATCTGGCTTTGTTGCTGGAATTGCAATTGGTCTTGCTGTACTAATCACAGGGCCTGTGTCAGGTGGATCAATGAACCCTGCAAGATCATTAGGACCAGCAATTGTTTCATGGAAATTCAAGGACATTTGGATATACATGATAGCCCCAAGTGGTGGAGCCATAGCAGGAGCTCAAACCCTTCGTTTTCTTCGCCTTAATAAGGACCAACCTTGCAACACCGATGTTGGTCACCCCATACCCTATTGTTCAAATTATAATGGGAATGTTAAGCCAAGCGTTACACAGATCGTTGTGGCTTCATCCATTGGGTTGATATTTGCTGTGGCAATGTCTTATCGGATCAAGGTTATGAGAGATCGCAAGATAATGCCACTTTTGAGAATTTCAAGGGCAGGCAAACATACTCCAAGGCTTGAAAGATTCTCTCATTACGTAGCTAGACAAATGGGGTTCAAAGATAGGAGGAGTTGTCCTCATCTGTGTAAATTAGCTTCTGAATACATAAGGAAGGCCGACGGATGCGAAGACGATATGTACGCCTTCTTCGAGGGCGAACCGGATGCAGATTCGCTCTTCGTGAAGCTCGTGGAGGAGTTTGAGAGATGCATTCTCAGTTACTTTTCATTCCATTGGAGCTACGGTGATCTATTGATAAGTCAGATATTGAGCTCTGAAAATGAGGCAAAAAAGAAGCTCAAGCACATAGTTATGGCCGCAACTAGAGAACAAAGGGTTGAGAGGCTAACAAAGAATTTGAAGGTGGCGAGAGTTTTTAACACTTTAGTAGAAGAGATGAAAGCAATGGGACTTGTAACAACCGATGACTCGAGATGCACAGAAGTAATGGCTCCAGTAGCTCATAGCGATAGAAGCCCGGTGCTTCTCTTCATGGGTGGTGGCATGGGAGCCGGCAAGAGCACTGTGCTCAAGGACATTCTTAAAGAACCTTTTTGGGCCGGAGCGGCAGGAAATGCTGTTATCATTGAGGCAGATGCCTTCAAAGAATCAGATGTTATCTATAGAGCCCTTAGTTCAAGGGGGCATCATGACATGATTCAAACAGCTGAATTGGTTCACCAATCCTCCACAGATGCAGCCTCATCACTCCTAGTAACTGCACTAAATGAAGGGAGGGATGTGATCATGGATGGAACACTCTCTTGGGTACCATTTGTAGTGCAAACAATAACCATGGCCAGAAACGTCCATCGGAAGCGTTACCGGATGGGTGTCGGCTACAAGTTGAACAGTGATGGATCTGTAATTGAAAACTATTGGGAAATTATTGATGATGAAGAACCTGAACAAGTTGGAGGGAAAAAAAGAAAACCATATAGAATAGAGTTGGTTGGAGTAATTTGTGATGCTTACCTTGCCGTCATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGGAGTAAGAGTGAAATCTCAATTAAAATCTCACAAAAGGTTTGCTGATGCATTTATGACATATTGTAACCTAGTAGACAATGCCAGGTTATACAGTACCAATGCTTTGGAAGGCCCACCCAAGTTGATAGGATGGAAAGATAGAGACAAGACACTACTTGTTGATCCAGATGAAATTGATTGTTTGAGGAGAGTTGCAAGGTTGAATGAAGATGCTGAATCCATATATGAGCTTTACAAGCATCCTAATCCAGCTTTTGAAGCAGGATCAATTTGGAAAGACATTGTATTATCCCCTTCAAGGCTCAACATCCAACAAGAGCTTAAGTATTCTATCCAAAAAATTGAGAGACTCAAAGATAACTTCATGAAGGAGTGA 2418 0.4189 MTDMYENQASPDVSNYASSSGISSGDDNKGIGYRAAKSKHLYLLGSNSWFQSFPFKIDLNFVRMVMAEVIGTFILMFCVSGIIASTKFQSGEVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGHVPWYKVPIYIIAQIAGSIFATFIGSLVYGIKSEVMITRPIQGCNSAFWVELIATFIIMFLVAALTSEYESVGQLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWKFKDIWIYMIAPSGGAIAGAQTLRFLRLNKDQPCNTDVGHPIPYCSNYNGNVKPSVTQIVVASSIGLIFAVAMSYRIKVMRDRKIMPLLRISRAGKHTPRLERFSHYVARQMGFKDRRSCPHLCKLASEYIRKADGCEDDMYAFFEGEPDADSLFVKLVEEFERCILSYFSFHWSYGDLLISQILSSENEAKKKLKHIVMAATREQRVERLTKNLKVARVFNTLVEEMKAMGLVTTDDSRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVIIEADAFKESDVIYRALSSRGHHDMIQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRKRYRMGVGYKLNSDGSVIENYWEIIDDEEPEQVGGKKRKPYRIELVGVICDAYLAVIRGIRRAIMCRRGVRVKSQLKSHKRFADAFMTYCNLVDNARLYSTNALEGPPKLIGWKDRDKTLLVDPDEIDCLRRVARLNEDAESIYELYKHPNPAFEAGSIWKDIVLSPSRLNIQQELKYSIQKIERLKDNFMKE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00576 805 CDD MIP 63 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00576 805 Pfam Zeta toxin 494 605 IPR010488 GO:0005524|GO:0016301
Aip03g00576 805 PRINTS Major intrinsic protein family signature 102 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00576 805 PRINTS Major intrinsic protein family signature 214 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00576 805 PRINTS Major intrinsic protein family signature 63 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00576 805 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00576 805 PRINTS Major intrinsic protein family signature 139 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00576 805 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00576 805 Gene3D - 483 719 IPR027417 -
Aip03g00576 805 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 296 801 - -
Aip03g00576 805 Coils Coil 792 805 - -
Aip03g00576 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 495 613 IPR027417 -
Aip03g00576 805 MobiDBLite consensus disorder prediction 1 24 - -
Aip03g00576 805 ProSitePatterns MIP family signature. 120 128 IPR022357 -
Aip03g00576 805 PANTHER UNCHARACTERIZED 296 801 IPR044802 -
Aip03g00576 805 SUPERFAMILY Aquaporin-like 58 275 IPR023271 -
Aip03g00576 805 Gene3D Glycerol uptake facilitator protein. 51 283 IPR023271 -
Aip03g00576 805 Pfam Major intrinsic protein 59 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00576 Aip-Chr3 5562750 5579584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00576 37 287 Major Intrinsic Protein MIP AT4G10380 40.467 1.03e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00576 - - mtr:MTR_1g070385 1312.75