Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00572 ATGGAGACTTTTGAGAAAGAAATGAATTATATGAAGAAGTATTATGGGAGTGGAGAGACAAAGAAAGTGTCATGGAGAGAATCACAACTCAAAGGGTTGCGTCGTTTCCTCATTGAAAAAGAAGAAGATATTTTGAAGGCCTTAATGCTCGACTTAGGAAAGCATCAAGTTGAAGCTTTTAGAGATGAGATAGGAACTTTGATGAAGTCCTTGAATTTTGCATTGAGTAACTTAAAATATTGGGTATCAGGCAAAAAGGCTAAATTGCCACAAATAGCACTGCTTAGTAGTGCAGAAATTGTTCCTGAACCTCTGGGCCTAGTCCTCATTATTTCATCTTGGAATTTCCCATTTGGTTTATCCTTGGAGCCACTAATAGGAGCAGTAGCAGCTGGAAACACAGTGGTCTTAAAGCCTTCAGAGTTATCACCAGCATGTTCTTCCATACTTGCCCTTGGACTTCCCAATTTCTTGGACAACAAAGCCATTAAGGTTGTACAAGGTGGACCCCATGAATCTCAGCACCTTCTCCAGCAAAAATGGGACAAAATCTTCTTCACAGGAAGTGCACGTGTGGGGAAGATTGTGATGTCAGCAGCAGCGAAGCATTTGACTCCTGTGACTTTGGAGTTGGGTGGAAAATGTCCTGCAGTTGTTGATTCACTTTCATCTTCTTGGGACTTGGAGGTAGCGGTGAAGCGAATTCTAGTGGGAAAATATGGGGCATGTGGTGGTCAAGCATGCATAGCAATTGACTATGTCCTCGTGGAAAATCAATACTATCCAAAACTGGTAGAATTGATGAAACTATGGATCAAGAAAATGTTTGGGGAGAACCCAAAAGACTCCAACACCATTGCAAGGATAGTTAATAAACAACACTTGTCTAGATTGAAGAATCTTTTGGCTGATCCAGAGATCAAGAAATCTGTGGTTTATGGAGGCTCTATGGACGAAAGAAACTTATTTATTGAGCCAACAATCTTGTTGAATCCCCCACTTGAATCAGTAATCATGACAGAAGAAATTTTTGGTCCATTGCTTCCAATTATTACTGTGGACAAAATTGAAAACAGTATTAAATTCATAAGCTCTAGGCCTAAGCCTCTTGCACTCTATGTCTTTTCCAAAGATAAGACACTGCAGAATAGAATGATATCTGAAACATCTTCTGGCAGTTTAACTTTCAATGATGCAATTCTACAATATGCAGCGGATTCTCTACCATTTGGTGGAGTTGGAGAAAGTGGATTTGGAATGTACCATGGGAAGTTCTCTTTTGATACATTCAGCAGCCAAAAGGCAGTAGTTAGAAGAAGCTTCCTCACTGATTTCTGGTATAGGTATCCACCATGGACACTGAACAAGTTTCAGCTTCTTGAGGTCTCTTACAACTATGATTATCTGGGGTTGCTCCTTGTCTTGCTTGGCCTAAAGACACCATCAAAACGCAGATCATATTTCGCTAACCCCTGA 1476 0.4038 METFEKEMNYMKKYYGSGETKKVSWRESQLKGLRRFLIEKEEDILKALMLDLGKHQVEAFRDEIGTLMKSLNFALSNLKYWVSGKKAKLPQIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSELSPACSSILALGLPNFLDNKAIKVVQGGPHESQHLLQQKWDKIFFTGSARVGKIVMSAAAKHLTPVTLELGGKCPAVVDSLSSSWDLEVAVKRILVGKYGACGGQACIAIDYVLVENQYYPKLVELMKLWIKKMFGENPKDSNTIARIVNKQHLSRLKNLLADPEIKKSVVYGGSMDERNLFIEPTILLNPPLESVIMTEEIFGPLLPIITVDKIENSIKFISSRPKPLALYVFSKDKTLQNRMISETSSGSLTFNDAILQYAADSLPFGGVGESGFGMYHGKFSFDTFSSQKAVVRRSFLTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGLKTPSKRRSYFANP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00572 491 Pfam Aldehyde dehydrogenase family 21 436 IPR015590 GO:0016491
Aip03g00572 491 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 13 434 IPR016162 GO:0016491
Aip03g00572 491 PANTHER ALDEHYDE DEHYDROGENASE 4 487 - -
Aip03g00572 491 PANTHER ALDEHYDE DEHYDROGENASE 4 487 IPR012394 GO:0006081
Aip03g00572 491 PIRSF ALDH 1 472 IPR012394 GO:0006081
Aip03g00572 491 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Aip03g00572 491 SUPERFAMILY ALDH-like 11 453 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00572 Aip-Chr3 5532813 5535771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00572 2 479 Aldehyde Dehydrogenase Gene Family AT4G36250 52.929 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00572 K00128 - gmx:100817701 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00572 03 5532813 5535771 Aip03g00572 03 5532813 5535771 ECH
Aip08g00371 08 2835192 2838414 Aip03g00572 03 5532813 5535771 PCT