Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00568 ATGGCGACTATCGTCGGCATCATCACGCAGCCGCTTCCGCTGGGGGCTGTTGCTATCATGGGTTTATGCACCGCCGTGCTCACCAAAACGCTAACATACGCCGCGGCGTTCTCGGCCTTTGGTGACCAGATACCTTGGCTGGTGGCTCTGGCTTTCTTCTTCGCCAAAGGTTTCATCAAAACCGGGTTAGGAACTCGAATCGCATACCACGTGGTGTCACTCGCCGGAAGCTCCTCCCTTGGATTAGGATACAGCTTGGTGTTGAGCGAAGCATTGCTTGCACCAGCCATACCTTCAGTTTCAGCAAGAGCAGGTGGGATCATACTCCCATTAGTGAAGTCTCTGAGCGAAGCATGTGGCAGCAACGTTGGCGATGGAACCGAGAGCAAGCTAGGCTCATGGCTCACTCTAACCTGCTTCCAAACCTCCGTCATCTCTTCTGCCATGTTCCTGACTGCCATGGCCGCCAACCCTCTGTGCGGGACGCTGGCGCGTGGGGCCATAGGGAGGGGGATTGGATGGAGCGATTGGGCCGTGGCGGCGGCGGTGCCGGGTGCGGTGTCATTGGTTGTTGTGCCGTTGATCTTGTACGTGATTTACCCGCCGGGCGTAAAGAATAGCCCTGATGCTCCAAGGGTTGCTAGGGACAAGTTGCAACTTATGGGACCTATGACTCTCAACGAAAACATCATGGCTGCTACTCTCTTCCTTACGGTAGGACTTTGGGTCTTTGGAGGGGTTCTTAATATTGATGCTGTCACTGCTGCCATTCTTGGATTATCTGCACTCCTTGTCACTGGGGTCGTAACATGGAAGGAGTGCTTGGCTGAGGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATTGCCATGGCTGGATATTTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACTGTGGTCAAGTTTGTTGGTGGATTGGGTCTCTCTTGGCAACTATCTTTTGGAATCCTTGTCCTCCTCTACTTCTACTCTCACTACTTCTTTGCAAGTGGGGCTGCTCATATAGGTGCCATGTTCACTGCTTTCTTGTCTGTCGCCACTGCTCTGGGAACTCCACCATTCTTTGGAGCCATGGTGCTTTCCTTCCTCTCCAACCTCATGGGCGGCCTTACTCATTATGGGATTGGATCAGCCCCCGTATTTTACGGCGCCAACTATGTTCCACTCGCCAAATGGTGGGGCTACGGATTCCTCATCAGTATTGTTAACATTGTAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAAGCCATTGGCTTGTGGTAA 1299 0.5242 MATIVGIITQPLPLGAVAIMGLCTAVLTKTLTYAAAFSAFGDQIPWLVALAFFFAKGFIKTGLGTRIAYHVVSLAGSSSLGLGYSLVLSEALLAPAIPSVSARAGGIILPLVKSLSEACGSNVGDGTESKLGSWLTLTCFQTSVISSAMFLTAMAANPLCGTLARGAIGRGIGWSDWAVAAAVPGAVSLVVVPLILYVIYPPGVKNSPDAPRVARDKLQLMGPMTLNENIMAATLFLTVGLWVFGGVLNIDAVTAAILGLSALLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFLISIVNIVIWLGLGGVWWKAIGLW 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00568 432 Pfam Sodium:sulfate symporter transmembrane region 2 432 IPR001898 GO:0016020|GO:0022857|GO:0055085
Aip03g00568 432 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 2 432 IPR030676 -
Aip03g00568 432 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 2 432 - -
Aip03g00568 432 PIRSF DASS 1 432 IPR030676 -
Aip03g00568 432 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 1 426 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00568 Aip-Chr3 5507477 5511912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00568 1 431 Antiporters AT5G12860 83.759 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00568 - - aip:107629031 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00568 03 5507477 5511912 Aip03g00568 03 5507477 5511912 ECH