Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00566 ATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGTTGGTGGCCTTCACACATCAAATCAAACCTTCACGACTTATCTGATAATGATGACGGGGGCAAGAATGAGAAGGATCAATGGGTTGGATTCAATGAGTACACGTGGGATCAGCTTAAGGTTGCAACTTCAGGTTTCTCACCAGAGAACATTGTCTCAGAACATGGAGAGAAAGCTCCCAATGTTGTTTACAAAGGAAGGCTTGAAGATGATAGGTTGGTTGCTGTGAAGCGCTTCAACAAATCAGCTTGGCCTGATTCGAGACAATTTCTAGAGGAAGCAAGAGCAGTGGGGCAGTTAAGGAATGAAAGATTAGCTAACTTGGTTGGATGCTGCTGTGAAGGAGAAGAGAGGTTGCTTGTTGCAGAGTTCATGCCACATGAAACTCTCTCCAAACATCTCTTCCACTGGGAGACACAGCCCATGAAATGGGCAATGAGGTTGAGGGTGGCATTGTATTTGGCACAAGCATTGGATTACTGCAGCAGTCGAGGAAGAGCATTGTATCATGATCTTAATGCTTATAGAATCTTGTTTGATGAGGATGCCAACCCCAGGCTCTCTTGTTTTGGACTCATGAAAAACAGTAGAGACGGCCGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCGGAGTACTTGAGGACCGGAAGAATCACCCCTGAAAGTGTAGTATACAGTTTTGGCACACTTTTGCTTGATCTTCTGAGTGGAAAGCATATTCCACCCAGTCATGCACTTGACCTTATACGCGGCAAAAATTTTTCCTTGCTGATGGACTCTTGTTTAGAAGGTCATTTTTCGAACGATGATGGAACTGAGATAGTGAGATTGGCTTCGCGTTGTCTACAATATGAACCTCGTGAGAGACCAAATGCAAAGTCACTTGTGACCGCTCTAACTCCTCTTCAGAAAGAAACTTCAGTATTCTCTATCTTTCACTCATTGACTTTCTTCATTGAAGACAGTTGGGAGCACCGGAACATATTTAGTATTTTGTTTATGGCTGTGGTATTTTGCAGGTACTGTCGTATGTTTTGA 1071 0.436 MGARCSKFSLCWWPSHIKSNLHDLSDNDDGGKNEKDQWVGFNEYTWDQLKVATSGFSPENIVSEHGEKAPNVVYKGRLEDDRLVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPHETLSKHLFHWETQPMKWAMRLRVALYLAQALDYCSSRGRALYHDLNAYRILFDEDANPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFSLLMDSCLEGHFSNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVFSIFHSLTFFIEDSWEHRNIFSILFMAVVFCRYCRMF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00566 356 SUPERFAMILY Protein kinase-like (PK-like) 37 318 IPR011009 -
Aip03g00566 356 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Aip03g00566 356 Gene3D Transferase(Phosphotransferase) domain 1 136 323 - -
Aip03g00566 356 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00566 356 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 322 IPR045845 GO:0004672|GO:0009742
Aip03g00566 356 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 322 - -
Aip03g00566 356 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00566 Aip-Chr3 5497651 5501398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00566 27 310 Glycoside Hydrolase AT3G07070 32.911 1.59e-41 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Aip03g00566 PK_Tyr_Ser-Thr 1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00566 - - gmx:732542 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00566 03 5497651 5501398 Aip03g00566 03 5497651 5501398 ECH