Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00561 ATGTCCTTCCTGGTGGAGTGGCTGTCCCACGCCCGGTTTATGAAACCCGGTTCCAACAAGCTCAGTGCCGGTTTGGGTAAGACCGTGTTACACCTCCTTAGAGTTGGTTTGGCATACCTCGTTATGCTTGCTCTCATGTCGTTCAACGCCGGTGTCTTCTTCATGGCTGTGTTGGGTCACGCTTTCGGCTTCTTCTTTGGTAGCAGGGCTTTGGCTAAACCACACAACGATAAGAGATATGATGATCTTCCGCCAATGTCTTGTTGA 267 0.5056 MSFLVEWLSHARFMKPGSNKLSAGLGKTVLHLLRVGLAYLVMLALMSFNAGVFFMAVLGHAFGFFFGSRALAKPHNDKRYDDLPPMSC 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00561 88 Pfam Ctr copper transporter family 18 66 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aip03g00561 88 PANTHER COPPER TRANSPORTER 6-LIKE 1 87 - -
Aip03g00561 88 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 87 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00561 Aip-Chr3 5464970 5465236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00561 1 87 Inorganic Solute Cotransporters AT3G46900 46.667 8.16e-23 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00561 K14686 - pop:7468602 115.931