Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00520 ATGGCTTCTTCGATGGCTCTCCCTATCGATCAACAACAACAACAACCACCTAGTGGTGAGAATGAGAAAAAGGTTATTGTGGCAGCAGCAGAAGGGAGGAACAATAGGCGTGCATTACAAGACATTGGTAATCTTGTGGCTAAGCAAGCAGAACAAAATGTGACAAAGCGCAACACAAGAAACTTTTATGCTAATGACCAAGCTGCAGCAGAGAAGAACAAGAAATCAAGCACTGAACTTGTGATTGGAGCAGCAGTGGTTCCAGCTAATGGGGTTGATGTGAGGAACTTCATTGTTGCAACAAAGTTAGAAGCAGATAAGAAGCCACCAACAGAACATGAAGTCATTGTCATCAGCTCAGATGATGAATCCGAGGAAGAAAAGAAGAAGAAGCCACAAGCTGCTAAAGGAAGAAAGATAAGGGAAAGGGTAACCAGGAAAAATGCTAAGGCTTTCAGTTCAGTCCTCTCGGCTAGAAGCAAGGCTGCTGGACTCACTTATATGCCAAAGGAAGTGGTGAACATTGATGCAACTGACATGGACAATGAATTGGCAGCAGTGGAGTACATTGATGACATATACAAGTTCTACAAACTCACTGAAGATGATGGTCGTGTGCATGATTATATGGGTTCACAGCCTGATATAAACGCCAAGATGAGATCAATCCTTGTGGACTGGTTGATAGAAGTGCATAGAAAATTTGAACTAATGCCAGAAACTCTCTATCTGACCCTCAACATTGTTGATCGGTTTCTGTCCATGAGGGTTGTTCCAAGAAGGGAGCTTCAGCTGGTTGGCATAAGTTCAATGCTGATTGCTTGCAAATATGAAGAAATCTGGGCTCCAGAGGTGAATGACTTTGTTGTCATATCAGACAATGCCTATATTAGAGAACAAGTTTTGGTCATGGAGAAAACAATCCTGGGAAAGCTTGAATGGTACCTAACGGTTCCCACACCCTATGTGTTCCTTGTTCGGTATATCAAGGCCTCCACTCCCTCTGATGATGAGATGGAGAATATGGTGTTCTTCCTTGCTGAACTTAGCATGTTGCACTATCCTACTATTATCTCCTATAGTCCTTCTGTGATTGCTGCTTCTGCTGTGTATGCTGCAAGATGTACCCTTAAAAGGGTTCCTTCTTGGACTGAAACTCTTGAACACTACACAGGCTACTCTGAGGAAAACATAAGAAATTGTGCCAAACAAATGGTAAACTTTCATGTTGCTGCTCCAGAAAGCAAGCTTAGAGCAGTTTACAAGAAATTCAGCAGCATGGATCGCAGTGCTGTTGCTCTTCTTACCCCGGCAAAGAACTTGCTAGCACAATCTTGA 1338 0.429 MASSMALPIDQQQQQPPSGENEKKVIVAAAEGRNNRRALQDIGNLVAKQAEQNVTKRNTRNFYANDQAAAEKNKKSSTELVIGAAVVPANGVDVRNFIVATKLEADKKPPTEHEVIVISSDDESEEEKKKKPQAAKGRKIRERVTRKNAKAFSSVLSARSKAAGLTYMPKEVVNIDATDMDNELAAVEYIDDIYKFYKLTEDDGRVHDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNIVDRFLSMRVVPRRELQLVGISSMLIACKYEEIWAPEVNDFVVISDNAYIREQVLVMEKTILGKLEWYLTVPTPYVFLVRYIKASTPSDDEMENMVFFLAELSMLHYPTIISYSPSVIAASAVYAARCTLKRVPSWTETLEHYTGYSEENIRNCAKQMVNFHVAAPESKLRAVYKKFSSMDRSAVALLTPAKNLLAQS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00520 445 SMART cyclin_7 226 310 IPR013763 -
Aip03g00520 445 SMART cyclin_7 323 407 IPR013763 -
Aip03g00520 445 PIRSF Cyclin_A_B_D_E 1 445 IPR039361 -
Aip03g00520 445 Pfam Cyclin, N-terminal domain 192 316 IPR006671 -
Aip03g00520 445 Gene3D - 192 433 - -
Aip03g00520 445 MobiDBLite consensus disorder prediction 1 20 - -
Aip03g00520 445 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
Aip03g00520 445 SUPERFAMILY Cyclin-like 320 440 IPR036915 -
Aip03g00520 445 CDD CYCLIN 220 309 IPR013763 -
Aip03g00520 445 Pfam Cyclin, C-terminal domain 319 437 IPR004367 -
Aip03g00520 445 Gene3D - 206 317 - -
Aip03g00520 445 PANTHER CYCLIN-B1-4 28 440 - -
Aip03g00520 445 MobiDBLite consensus disorder prediction 117 140 - -
Aip03g00520 445 SUPERFAMILY Cyclin-like 181 316 IPR036915 -
Aip03g00520 445 SMART Cyclin_C_2 319 438 IPR004367 -
Aip03g00520 445 CDD CYCLIN 317 406 IPR013763 -
Aip03g00520 445 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g00520 445 PANTHER CYCLINS 28 440 IPR039361 -
Aip03g00520 445 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00520 Aip-Chr3 4974843 4977659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00520 10 435 Core Cell Cycle Gene Families AT2G26760 51.408 3.82e-144 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00520 K21777 - gmx:547782 566.614