Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00517 ATGGTGGTGGCAATGGTCCTTGATAGTGCTCTTGCCGTTGAAGTTGCTATTGCTGTTGAGATTGTTGCTGCGATAGGAAGGAGAGAAAAGTGTGCGTTGGGGTTACTGCTGTTGTTGTTGCTGTTGATGTTGAGGCGGTTGTTGCTGCGAGTGGTAGTGGAGGGAGGGAGGGGGAATGTGCATTGGGGAGGGGGTGCGATAGGGAGAGGGGAGGAGGGTTGCGATGGGGAGGGAGAGGGAGGGGGAGTATGCGCTGGGGAGGGAGGGATTAGGGTTTGGGGGTGGTTTGCCAGCCCATGCACATTTCATGATCTCGCAATAGTCCTCATCATTGCATTGACAACAATGGAGATAAACCAAACAATTTTCAAGCAAGTGAGAGTGATAGAGTCAACACAGAAATCCACTATCTATGAAGTTTGTCTCCATATACCGCCCAAAATAGTGTCGGACGGCATCTGGGCCAACAAAAAATCCGGCAACTTCCCTTTGCAGTCAAGTTTGACATTGTTAGAGATGCAAATTTGCGTCATTTTCACCCTCATGCATTGCTTTCATTTCGTTCTCAAGCGATTGGGGTTCCCCTATTTCGTTTCGCAGGTGTTGGTTGGCTTTGTTCTAGGCCCTTCATTGAATATAGATTGGTTGAACAAATACAAAATGATGGTGTTTCCTTATGGAACTGAAGAAGTATTGGGGCTAATTTCATTGGTTGGCTACACATTCTACATGTTTCTGAATTCTGTGCAAATGGATTTTAGCATGATAACAAGAAGTGGTATGAAACCTTGGGCAATGGCGGTTGCTGCAGTAGTTGGACCTCTGGTCATCTGTTTGAGCATATCTTTTGGAACAAGAACTGTCTGGCAAGAAGTCGCTGGACCCGGGGAAACATTGAATTTGGTGGTGATTACCCAAGCTGGCTGCTCCTTTGTTGTCATAGCTTCCTGCCTCTCTGAACTAGACATCTTGAACTCTGAACTCGGACGCATTGCGTTGACAACAGCGCTTTCGAGCGATTTCCTTACTGCCATAATGAATTCACTAAGCATTATCTTTACCAAGAGCCAAGCTGAAAAATATGATGCAAAAAAAATGGCTAGTGTCTTGGCAGTGTATTTTGCTATTGTAGTCCTAGTTCCTCTCATCGGCCGCCCTACAATGAAGTGGGTGGCCAAGAACACCCCGGAAGGAAGGCCGGTGAGGAAGATATACACCTTTGCCATGGTCCTCTCGGCTCTTATCATAGGGTGTTTTGCACTAGAAGCCAACCTACCCATCATATTTGGAATTGTGATGTTAGGATTCGTCGTGCCGGAAGGTCCTCCATTAGGATCTGAGCTAGTCAAGCAATTTGAGTTGATCAATGTATGGTTCTTTCTGCCACTCTTCGTGACCGCTGCCGCCATGAAGGTAGATCTTAACAAAATAGGTGATGACCCTGCTATGGCAGTGGTTACAACAGCAGTCATATTGATGGTCCATTTGATCAAGATGTTATTGTGCACAATAATTTGCATCTTTTGCAAGATACCAACAAGAGATACTATCTGCCTTGGTCTAATCTTATGCTGCAAAGGTGTTGTGGATTTTAGTGTCTACCTGTTTCTGTATGAATCAGGGACATTGAATAGTTCAACAGTTGCTACACTGTTTGTATCTGCATTGATACTTGGAAGCACTGCATATATTGGTATCAAGTCCTTATATGACCCTTCAAGGAAATATGCAGGGTACCAAAAAAGGGACATTTTGCATTTGAAACCAAATTCAGATCTTAGGATTGTTGCATGCATCCAAAAACCATATCATGTGAATATGATCAAGAATATGTTGTATCTTTGTTGTCCAACAATAACTAGCCCTCTTCAGGTGGAAATACTGCACCTCATAGAGCTAGTTGGGAGTGCCACCCCCATCTTTATCTCACACCAGCTCCAAGAGTCGGTCAGCAGAAGTCACAACTACTCCGGCGATATCATGCTCGCCTTTGATCTCTTCAAGCATGAGAACGCCACAGTAGAAGTGAACACCTACACTGCCGTATCGCCACAGCGCCTCATGTACGAAGATATCTGCCATCTTGCCCTGGACAAGGTTGCATCCCTCATTCTCCTTCCGTTTCATATCAGATGGGCTGACGACGGTTCTATTGATTCAACCGAAGAGAGCATACGGACCCTGAACAACAAGGTACTTGAAAAAGCACCATGCTCGGTTGCCATTCTTGTGAATAAAGGCCCTTGTGACATTGCATCAAAGCACATAGCCATGATCTTCTTGGGGGGTTCAGATGATAGAGAAGCATTGTGCCTTGCTAAAAGGGCAATCACAGAACTTCATTATAAATTGGTTGTGTACCATTTGGTTGGAACACAGAATGAGTCCAGCAATTGGGACACTATGCTTGATGAAGAGGTGCTACAGAGTGTGAAGGGGTGTTATGGAACTGTTGACAATGTTGCATATGAAAGAATATTAATTGAGGATCCTTCACAAACCCAAAGATTCATTCAGACTATAGCTGTTGAGCATGATTACTTCATAGTTGGGAGACGCCATGGTGTCAAATCATCTCTTACAGCAGCACTTGAAAAATGGACTGAGTTCTCAGAGTTAGGTGCAATTGGGGATTTGCTTGCATCACCAGATACCAATTCTAAAGCTACAATTTTAGTTGTGCAGCAACAGAAAATGCCACAGCCTAACTCATAG 2715 0.4449 MVVAMVLDSALAVEVAIAVEIVAAIGRREKCALGLLLLLLLLMLRRLLLRVVVEGGRGNVHWGGGAIGRGEEGCDGEGEGGGVCAGEGGIRVWGWFASPCTFHDLAIVLIIALTTMEINQTIFKQVRVIESTQKSTIYEVCLHIPPKIVSDGIWANKKSGNFPLQSSLTLLEMQICVIFTLMHCFHFVLKRLGFPYFVSQVLVGFVLGPSLNIDWLNKYKMMVFPYGTEEVLGLISLVGYTFYMFLNSVQMDFSMITRSGMKPWAMAVAAVVGPLVICLSISFGTRTVWQEVAGPGETLNLVVITQAGCSFVVIASCLSELDILNSELGRIALTTALSSDFLTAIMNSLSIIFTKSQAEKYDAKKMASVLAVYFAIVVLVPLIGRPTMKWVAKNTPEGRPVRKIYTFAMVLSALIIGCFALEANLPIIFGIVMLGFVVPEGPPLGSELVKQFELINVWFFLPLFVTAAAMKVDLNKIGDDPAMAVVTTAVILMVHLIKMLLCTIICIFCKIPTRDTICLGLILCCKGVVDFSVYLFLYESGTLNSSTVATLFVSALILGSTAYIGIKSLYDPSRKYAGYQKRDILHLKPNSDLRIVACIQKPYHVNMIKNMLYLCCPTITSPLQVEILHLIELVGSATPIFISHQLQESVSRSHNYSGDIMLAFDLFKHENATVEVNTYTAVSPQRLMYEDICHLALDKVASLILLPFHIRWADDGSIDSTEESIRTLNNKVLEKAPCSVAILVNKGPCDIASKHIAMIFLGGSDDREALCLAKRAITELHYKLVVYHLVGTQNESSNWDTMLDEEVLQSVKGCYGTVDNVAYERILIEDPSQTQRFIQTIAVEHDYFIVGRRHGVKSSLTAALEKWTEFSELGAIGDLLASPDTNSKATILVVQQQKMPQPNS 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00517 904 Gene3D - 170 576 IPR038770 -
Aip03g00517 904 PANTHER CATION/H+ EXCHANGER 2 122 901 - -
Aip03g00517 904 Pfam Sodium/hydrogen exchanger family 177 557 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip03g00517 904 PANTHER CATION/H + ANTIPORTER 122 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00517 Aip-Chr3 4955897 4960318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00517 140 894 Antiporter Super Family AT3G44900 35.990 8.69e-148 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00517 - - adu:110273497 1357.81