Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00503 ATGGGTGAGGAAGTTAGGATGACCGACTACCAAGACGACGACCGAGTCGCCGACTGGGAATTGGGCCTTCCGGCGGTCCATGATCTCACCCCGCTCTCTCAGCTCTTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCTCGCCGGAGCCACACCGTTCCCTTGTCGACGTCAACCGCGCCTCAAAGAACACTCTCTCCACCCTCCGTACCGGCGTCAACGCCTTCTCCTCCTCCAACCTCAACCCCTTCCAAGACGAGGGAAACGATCCCGCCGGAGACGACGAGGAAGAGATCGTTCCGGACGGTTCGGGCTCCAATTCGAGGAAGCTCCGGAAGGTCGATTGTGCGGAGGAAGCGGATTCTGTGCCGCGCACCGACAGTGCCGCCGCCGTGAAGCGACCGAGGCTTGTGTGGACACCGCAGCTGCACAAGCGATTCGTGGACGTGGTGGCGCACCTAGGGATCAAGAACGCGGTGCCGAAGACGATCATGCAGCTTATGAACGTGGAAGGGTTGACCCGAGAGAACGTCGCCAGCCACCTCCAGAAGTATCGCCTCTATCTTAAGCGGATGCAAGGGCTCTCCGCCGACGGACCTTCTTCCTCCGACCACCTCTTCGCCTCCACGCCGGTTCCTCAAAGCCTCAACGACAGCGGCGGAGGAGGAGGAAGTGGCCACTCCCGTGGGAACGGGCACCTTCCGGTTCCGGTCCCGATGCATTATCCTCCGGCGGCGATGATGCCAATGCCGATGCTCGGCATGCCACATGGCTTTCATCATCACCATGTGTTGCAGCAGAGGGATTGGTCCTACCCACCACATATCTTTGGTGTCGGCGACCAATCGGTGAAGATGTCGCCGTCGAACAGGTTGCAGAACGGCGGCGGCGTCTGTGGCGGTGTCGGCATTAAGTATGGCGTTGAGGTAGCTGATATCAAAAGGGTGAACGGGTTAGCCACGGATCTTCAAATCTTTGCACTGAAGACATTGAAAATTCCGTTACCGGGACGACATCCGCCATCCCCCTCTCCGACTTCGAGTGTACCTAATGGACATGCAAAGTTGGGGGATAATAGCTCGGAAAGAAGACCCCCACGTGCAGAACAACAGATAGAGATTGGTGTGCCTGCTCTTACTTCTCTTGGTGGTCATGGACTCATGGACATGTTACGAACTGATCAGCACGATTTAAGCTTAATTTTGAGCAAGCAACAAATTTGTGAAATAGATTTCTTAAAAGTAACGGTAAGATTCAAAGAAAGGGTAAAGTTGGTTGGAAGACAATCAAAGGAAACTTGA 1302 0.5591 MGEEVRMTDYQDDDRVADWELGLPAVHDLTPLSQLLIPPELASAFSISPEPHRSLVDVNRASKNTLSTLRTGVNAFSSSNLNPFQDEGNDPAGDDEEEIVPDGSGSNSRKLRKVDCAEEADSVPRTDSAAAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSADGPSSSDHLFASTPVPQSLNDSGGGGGSGHSRGNGHLPVPVPMHYPPAAMMPMPMLGMPHGFHHHHVLQQRDWSYPPHIFGVGDQSVKMSPSNRLQNGGGVCGGVGIKYGVEVADIKRVNGLATDLQIFALKTLKIPLPGRHPPSPSPTSSVPNGHAKLGDNSSERRPPRAEQQIEIGVPALTSLGGHGLMDMLRTDQHDLSLILSKQQICEIDFLKVTVRFKERVKLVGRQSKET 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00503 433 MobiDBLite consensus disorder prediction 108 122 - -
Aip03g00503 433 CDD LysM 305 333 IPR018392 -
Aip03g00503 433 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 270 IPR044841 GO:0003700|GO:0006355
Aip03g00503 433 Pfam Myb-like DNA-binding domain 138 186 IPR001005 -
Aip03g00503 433 MobiDBLite consensus disorder prediction 199 235 - -
Aip03g00503 433 Gene3D - 131 193 - -
Aip03g00503 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 190 IPR017930 -
Aip03g00503 433 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 270 - -
Aip03g00503 433 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 135 187 IPR006447 GO:0003677
Aip03g00503 433 MobiDBLite consensus disorder prediction 334 369 - -
Aip03g00503 433 Gene3D LysM domain 299 341 IPR036779 -
Aip03g00503 433 SUPERFAMILY Homeodomain-like 132 191 IPR009057 -
Aip03g00503 433 MobiDBLite consensus disorder prediction 77 130 - -
Aip03g00503 433 MobiDBLite consensus disorder prediction 199 224 - -
Aip03g00503 433 ProSiteProfiles LysM domain profile. 288 333 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00503 Aip-Chr3 4882654 4886590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00503 1 261 G2-like Transcription Factor Family AT3G46640 54.196 5.39e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip03g00503 Myb_DNA-binding 2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00503 - - zju:107411020 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00503 03 4882654 4886590 Aip03g00503 03 4882654 4886590 ECH