Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00491 ATGAAGTTTGATTCTGTCTCTAATTTTTTTTCCCAGTTCTTGTGTTTGGAAGCAATCATGATCTCTGCAGATTCTCGTACGGAGAATTATGCTGGTTTCGTATATGAGAATGGTCCTATGTCGGTGTTCTCCAATAGTAATAATCATCAGAACCCTGAAAATGTGTTCAAGTTTGAAGATTCATCTTCAAATCATGCAGAATCTCCTACTAGTGATGATCCTGATGGCACAAATAATGGAGAATCACACGCAGAGAGTACTAAGCACTCAAACCCTATTCTCAGATACATAAGTGAGATTCTGTTGGATGAGGAAGATGATTTGCAGCAAAAGCCCTGTATGTTGCATGATTGTTTGAAGCTCCAGGCTGCCGAGAAGGGGTTCTACGACGCCATCGGCCGCAGCTACCCTTCGTCGCCGTCAAAGATCTATGGTGGTTTTGGGGATGATTGCCATGATCCTGATGATAGTAATTTTGGTAGAACAACTAGCTCTGAGAGCAATAGTAGCAGCTACAACACTAGTGAAAATTCATGCGAGTCTGATTGGTTCAATGGATGGGGTGATTTTGAGTCCAAATTCCTTCAAAACACTCTGATTGAGTCCCCAGAAATAAAGAACTCCTATGAGGTTTTAGGGTTAGGTAATTCTCAAATTAGGGATTCGCATGGTTCTGTCTATTTTCAAAATGGAACCTTGCACAACATAATTCCAGATATGCTGCCACCAATTACTGGAGGAGGTAGTGGTAGATCAAGGGAAAAGAGGAGCCATCATGTGGATGATGCCACACAAGAAGGGGAGAGAGGAAACAAGCTCTCAGCTGTGTATGCCGATGAGTCGGAGCCATTGGAGATGTTTGATGCAGTGCTGCTTTGTCAGGATGGCAAGAGTCCTGCCATTTTTTGTGGCGACCGCGAATCCGACTCGGGTGGATCTAATGTGAAGGCAAGCCGTTCGAAGAAAGGTGCGAACAAGGGTGGAGCTACCAACAAAGGGGGCACCATAAGTACAACAGTTGATTTATGGAGTCTCCTAACTCAATGTGCACAAGCTGTGGCAAGCTATGATCAGAGGAGTGCGAATGAGATACTCAAGCAGATAAGGCAGAACTCTCCGGCTTCTGGCGATGGGTTGCAGCGTTTGGCTAAGTACTTCGCCGATGGCCTTGAGTCGAGGTTAGCTGCCGGGACACCCAAGTATATCCTCCTTCAGTCAGCATCTGCTGCAGATATGTTAAAGGCATACAAAGTTTACATCACAGCCATCCCATTTCAAAGGATGTCAAATTTCTTGGCTAATAGGACTATTCTGAAGCTAGCACAGAATGAAAGCAGTCTTCACATTATTGACTTTGGGATTTTCTATGGTTTCCAGTGGCCTTGCCTCATCCAGCGCCTTTCAGAGAGACCTGGAGGGCCTCCTAGGCTTCGGATCACTGGAATTGATCTTCCTCAGCCTGGATTCAGGCCTGCAGAAAGGGTTGAGGAGACCGGGCGACGCTTGAAAAACTATTGCAAGAGGTTTGGGGTCCCATTTGAGTACAATTGCCTTGCACAGAAGTGGGAAACCATACAACTCGAAGATCTCAATATCGATAGGAATGAAGTGACCGTGGTTAACTGTCTATACAGATTGAAGAACCTGTCTGATGAGACTGTGACCGCGAACTGTCCAAGGGATGCCGTATTAAGGTTGATCAGGAGGATAAATCCAAACATCTTTATCCATGGTGTGATCAATGGCACTTACAATGCCCCATTTTTCTTGACTCGTTTCAGGGAGGCGCTCTTCCACTTCTCGGCATTGTTTGACATGTTTGAGGCCACTGTGCCACGCGACAATCCACATAGGCTGATGTTTGAGCAGGGGTTGTTTGGAAGGGATGCCATCAATGTCATAGCATGTGAAGGGGCTGAAAGAGTAGAAAGGCCAGAGACCTATAAGCAGTGGCAAGTTAGGAACAGAAGAGCAGGGTTCAAGCAACTTGCAATTGCACCAGAACTGTTAAATAGAGTCAAAGGAATGGTGAAGAAGGAATATCACAAAGATTTTGTAGTGGATGAAGACGGAAAATGGGTCTTACAAGGATGGAAAGGGAGAATTCTCCATGCGCTCTCTCCTTGGGTTCCTGCTTAA 2139 0.454 MKFDSVSNFFSQFLCLEAIMISADSRTENYAGFVYENGPMSVFSNSNNHQNPENVFKFEDSSSNHAESPTSDDPDGTNNGESHAESTKHSNPILRYISEILLDEEDDLQQKPCMLHDCLKLQAAEKGFYDAIGRSYPSSPSKIYGGFGDDCHDPDDSNFGRTTSSESNSSSYNTSENSCESDWFNGWGDFESKFLQNTLIESPEIKNSYEVLGLGNSQIRDSHGSVYFQNGTLHNIIPDMLPPITGGGSGRSREKRSHHVDDATQEGERGNKLSAVYADESEPLEMFDAVLLCQDGKSPAIFCGDRESDSGGSNVKASRSKKGANKGGATNKGGTISTTVDLWSLLTQCAQAVASYDQRSANEILKQIRQNSPASGDGLQRLAKYFADGLESRLAAGTPKYILLQSASAADMLKAYKVYITAIPFQRMSNFLANRTILKLAQNESSLHIIDFGIFYGFQWPCLIQRLSERPGGPPRLRITGIDLPQPGFRPAERVEETGRRLKNYCKRFGVPFEYNCLAQKWETIQLEDLNIDRNEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPNIFIHGVINGTYNAPFFLTRFREALFHFSALFDMFEATVPRDNPHRLMFEQGLFGRDAINVIACEGAERVERPETYKQWQVRNRRAGFKQLAIAPELLNRVKGMVKKEYHKDFVVDEDGKWVLQGWKGRILHALSPWVPA 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00491 712 ProSiteProfiles GRAS family profile. 333 710 IPR005202 -
Aip03g00491 712 Pfam GRAS domain family 344 709 IPR005202 -
Aip03g00491 712 MobiDBLite consensus disorder prediction 239 272 - -
Aip03g00491 712 MobiDBLite consensus disorder prediction 251 268 - -
Aip03g00491 712 MobiDBLite consensus disorder prediction 160 175 - -
Aip03g00491 712 MobiDBLite consensus disorder prediction 44 89 - -
Aip03g00491 712 MobiDBLite consensus disorder prediction 304 331 - -
Aip03g00491 712 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 711 IPR005202 -
Aip03g00491 712 MobiDBLite consensus disorder prediction 146 175 - -
Aip03g00491 712 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 44 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00491 Aip-Chr3 4764737 4767314 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00491 93 712 GRAS Transcription Factor Family AT1G07530 44.493 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip03g00491 GRAS 9.4e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00491 - - gmx:100815586 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00491 03 4764737 4767314 Aip03g00491 03 4764737 4767314 ECH
Aip03g00491 03 4764737 4767314 Aip08g00407 08 3108041 3111305 PCT