Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00480 ATGAAGTGCTTCCACTTCCCAAGCATCGAAAGAGACCACCGGCGAGACTACGACAACGAAGACGGCGTCGTTTCAAGTAGCTGCAGAACCTCAAGGGTCTCATGGGCCCGCTCCCTCAGCGTCGCTTCCTCAACCCTCGTTCGCAACTCCGAGTTCGACGACACCGACTCTTCCTTCAACGACACCCTCGCTTTCCATGACTTCCTCTCTCTTCGCCGCGCCAACAACCTCCTTCTCTTCTCATTCTCTCAGCTCAAAACCGCCACTCGCGGATTCAGCAGGGCCCTCTTGATCGGCGAGGGTGGCTTCGGCCCTGTCTACAGGGGGACCCTTTCTGTTCCCGATGACGGTGACGGTGACGGTGACGGTCTTTCAGAGGTTCAGATGGAGGTTGCAATTAAGCAGCTGAATCGTAACGGCCACCAGGGGCATAAAGAGTGGATTAATGAAGTGAACTTGTTGGGTGTGATCAAGCATCCGAATCTCGTGAGGTTGGTGGGGTATTGTGCAGAGGATGATGAAAGAGGGATTCAAAGACTTCTTGTGTATGAACTTATGCCTAATAAGAGCTTGGAAGACCATCTTCTGGCTCGAGTCTCATCAATGTCAACACTACCATGGACCACGAGATTAAAAATTGCTCAAGATGCAGCTCGCGGTTTGGCATACCTTCATGAAGAAATGGATTTTCAGGTTGTTGGTACCATAGGTTATGCTGCACCAGAGTATGTTCAGACTGGTAAGCTGACTGCTAAGAGTGATGTATGGAGCTTCGGTGTAGTTCTTTACGAGCTTATCACTGGTAGGAGAGCTGTAGAACGGAACCTACCCAGAAATGAACAGAGGCTCTTGGAGTGGGTAAGACCTTATGTTTCTGATCCTAGGAAGTTCCATGTTATAGTAGACCCAAAACTTGAAGGACAATATTGCATGAAATCAGCTCAAAAGCTTGCTACTCTAGCAAACAAGTGCCTCATGAAGCAGCCTAAGTCACGTCCGAAAATGAGTGACGTGGTTGAGTTTCTCGCAAACATTCTCAACGATACTATTCAGGAAGAAAGCATCCCTCAAGCTGTTGTAGCCAACGGAGAAGAGAAAGTGAAGCCATCATCTGTCAAGGACATAGAACCTGAACCAGCTGCTAAGCAAGGGAACAATTATCTGAAGAAGGTTTTTGAGTTTAGAGACATGGTGAGCTTAAGAAACAAGTCCATTGGAAGGTTAGATTGGAAAAATTGGGCACCTGGGCTTGTAAGAACTTGGTGA 1266 0.481 MKCFHFPSIERDHRRDYDNEDGVVSSSCRTSRVSWARSLSVASSTLVRNSEFDDTDSSFNDTLAFHDFLSLRRANNLLLFSFSQLKTATRGFSRALLIGEGGFGPVYRGTLSVPDDGDGDGDGLSEVQMEVAIKQLNRNGHQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYELMPNKSLEDHLLARVSSMSTLPWTTRLKIAQDAARGLAYLHEEMDFQVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQRLLEWVRPYVSDPRKFHVIVDPKLEGQYCMKSAQKLATLANKCLMKQPKSRPKMSDVVEFLANILNDTIQEESIPQAVVANGEEKVKPSSVKDIEPEPAAKQGNNYLKKVFEFRDMVSLRNKSIGRLDWKNWAPGLVRTW 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00480 421 Gene3D Transferase(Phosphotransferase) domain 1 229 365 - -
Aip03g00480 421 ProSiteProfiles Protein kinase domain profile. 92 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00480 421 Pfam Protein kinase domain 231 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00480 421 Pfam Protein tyrosine and serine/threonine kinase 98 227 IPR001245 GO:0004672|GO:0006468
Aip03g00480 421 SUPERFAMILY Protein kinase-like (PK-like) 73 342 IPR011009 -
Aip03g00480 421 PANTHER OS01G0588500 PROTEIN-RELATED 37 233 - -
Aip03g00480 421 PANTHER OS01G0588500 PROTEIN-RELATED 232 357 - -
Aip03g00480 421 Gene3D Phosphorylase Kinase; domain 1 62 185 - -
Aip03g00480 421 Gene3D Transferase(Phosphotransferase) domain 1 186 228 - -
Aip03g00480 421 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 37 233 - -
Aip03g00480 421 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 232 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00480 Aip-Chr3 4664366 4667367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00480 80 394 Glycoside Hydrolase AT3G07070 39.045 5.58e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip03g00480 PK_Tyr_Ser-Thr 1.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00480 - - gmx:100305425 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00480 03 4664366 4667367 Aip03g00480 03 4664366 4667367 ECH