Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00479 ATGGGAATTTGTTTGAGCAACCAAATTAAAGCTGAGACCCCATATAACACTGGGTTAAGTTCAAAGAATGTTGGTACCCATAGAAATGATCTCAGCAACCAAAATAGTAAGGTGTCAACGGTTTCAATGCCTCAAAATCCACGAACTGAGGGTGAGATCTTGCAGTCACCGAATCTAAAGAGCTTTACTTTGATAGAACTTAAGGCTGCAACAAGAAATTTTCGTCCGGACAGCGTCTTGGGAGAAGGTGGATTTGGATCAGTTTTTAAGGGATGGATTGATGAGCAGACATTTGCAGCTGCTAAACCTGGCACTGGCATTGTTATTGCTGTGAAGAAACTTAATCAGGATGGTTTCCAAGGTCACAAGGAGTGGTTGGCTGAAGTGAACTATCTAGGCCAGCTTTCTCATCCCCATCTGGTGAAATTGATTGGGTATTGTCTTGAAGATGAACACCGCCTTCTGGTCTACGAATTCATGCCTCGTGGAAGCTTGGAGAATCATTTGTTCAGGAGAGGCTCATATTTTCAACCTCTTTCGTGGTGCCTTCGCTTGAAGGTTGCTCTTGGTGCTGCAAAAGGGCTTGCATTTCTTCATAGTGCCGAAACAAAAGTCATATATAGGGACTTCAAGACTTCAAATGTGTTGCTTGATTCAAATTATAATGCAAAACTTTCTGATTTCGGTTTGGCGAAGGATGGCCCTACCGGTGACAAAAGTCATGTCTCCACAAGGGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCAACTGGTCATCTCACTGCTAAGAGTGATGTCTTTAGTTTTGGAGTTGTCCTATTGGAAATGTTATCAGGTCGGAGGGCTGTTGATAAGAACCGTCCTTCTGGACAGCACAACTTGGTGGAATGGGCGAAACCATACCTTGCGAACAAGCGCAAGGTTCATCGAGTGATGGATAACCGTCTAGAAGGCCAATACTCTCCAGATGAGGCCTTTAAGGTAGCTGTCCTTGCACTAAGGTGCCTAGCACCAGAGTCCAAGTTGAGGCCAAGCATGGATGAAGTTGTTAGCAGTTTGGAGCAGCTTCAGATTGTCAATGTAAATCAGAATCGTCCTGGCAATGGCCATAGAGTTCGCAGAAGAAGCGCCGATGATGCTAAACCTGTGAGAATTAGCACGGCATATCCTCGGCCATCTGCAACTGCACTCTGCACTTGA 1209 0.4483 MGICLSNQIKAETPYNTGLSSKNVGTHRNDLSNQNSKVSTVSMPQNPRTEGEILQSPNLKSFTLIELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTFAAAKPGTGIVIAVKKLNQDGFQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWCLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVFSFGVVLLEMLSGRRAVDKNRPSGQHNLVEWAKPYLANKRKVHRVMDNRLEGQYSPDEAFKVAVLALRCLAPESKLRPSMDEVVSSLEQLQIVNVNQNRPGNGHRVRRRSADDAKPVRISTAYPRPSATALCT 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00479 402 MobiDBLite consensus disorder prediction 20 51 - -
Aip03g00479 402 MobiDBLite consensus disorder prediction 366 387 - -
Aip03g00479 402 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Aip03g00479 402 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00479 402 PANTHER OS01G0588500 PROTEIN-RELATED 25 376 - -
Aip03g00479 402 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 25 376 - -
Aip03g00479 402 CDD STKc_IRAK 80 359 - -
Aip03g00479 402 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Aip03g00479 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Aip03g00479 402 Gene3D Transferase(Phosphotransferase) domain 1 160 376 - -
Aip03g00479 402 ProSitePatterns Protein kinases ATP-binding region signature. 80 113 IPR017441 GO:0005524
Aip03g00479 402 SUPERFAMILY Protein kinase-like (PK-like) 47 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00479 Aip-Chr3 4660969 4663671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00479 44 356 Glycoside Hydrolase AT3G07070 49.538 3.53e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip03g00479 PK_Tyr_Ser-Thr 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00479 - - gmx:100798404 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00479 03 4660969 4663671 Aip03g00479 03 4660969 4663671 ECH
Aip08g00416 08 3186932 3189116 Aip03g00479 03 4660969 4663671 PCT