Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00477 ATGGGAAAGAAGCACTCTCTTTCTTGCATGAAGACATCAGCTACTGTTGAATTCCATCAGGAGAATAATGATGAAGGACCAAGATGCATGTGGGGCATGCTTCATATTCTTGATTACCATCATTGGCTTAATATCAGAAATGTGTTCCCCCTTAAAAAGCACCATTACCCTTCAAGACTTGCCACATATAAGAGAATAAACATTTTGCATAGCCATTGGGGAGACCAACAAATTGGAGATGAAGAAACAGAACCCCTCTTGCAGGCTAGGCAACATGAACAAAAGTGTAGTGCTAAAGGCAAAAGTTCTTCCAAGAGCAGAAATAAAAGATCACAAACTGAAAACTCCAAAGGCTGGATCATTAGCTTCCATGGTGAATCCAAAAATTTAGGTTCATCACATAAATTTGTGCAAAGTAAAGCACATAATACCAAAGAAGGTGTCCTTGATCAAAGTCTTATGGAAGCAAATAAGCTTCACAGAGATACTCCTGTTAATTCTAAGAGGTATTCTGATTCTTTGGAGGTACTTGGAGTGGAGAAGGATTTGATATTAAAATATTTACATGATCTTCATGTTGGTGGGGAAAATCTTCAACTTCAATTGGCTTTCAATAAAAAAGCAAGTTTGAAAAAATCAGGTTCAGTTCATCAGACATCACAGGTGAGAAGCATTATTAGTCCTACCACCTTCGAACACAAGCAAAGCGAAATTTGGCCTTTCGACAAGAAGAACAAGTTGCTTCATAGTACTCAAGCATTAAAGACCTTTGCATCCATTAAACAAAAACAAAGATTTTCTTCCTCTTCAAGCAATCCTCAAGGTTTGAATCACAAAGGGTGGAACCAATTAGTTCTTCATCGTTTCAAGGTTATTAAACAGAAGATTAAACATGCTCTTAAGGAATTCAAGAAAAGTGGCTACCAAACTTCTGTTGAAGCTATCCACCACCATAGAGCTTCATCTGAATATGGCATCACCAATACTGAGAATGGAATCTCAGATGAGAATAAATATTTTTGTTTTGATTCCAGCAGACACGAATTTTGCGGCTGCAAGCGAAGAAAATCCTCTCTTAATGGTGAGTCTATTGATAGATACACTCAGTTGTTTGAGCAAAGCTTTGGCAAAGATATCAAGTGTCATGGATCAATGTCTAAAAGCTTAAAATTTCCAAATGAGGATAAGGATAATAGCATGAGTTTGTGTCAGTGTCCTCCTAAGGCTTCTAGAAGGGATTTGTCCCTGCCTAATCTTGATTCTTTCAACTTCTTGATTCTACATGAGGCACTTTCTGTTGCAAATGATATCCATGTTCAGAGAAAACCAGTGAGACTTCCTTTAAACAAGGACATTTCACTTGATCACATTACAGAAACCGAAATGGAGGAAGCAATGGATATCAGAGGCAATGATGCGAATGCTGCTCCTTTATCTGATAAAACCATGGAGACAAACGATGGGGAACTCGAAGATGATGTATCATCGGATACACATGAGCTAGCTTTAGAAGATGGAAGTTTTCTCCAAGAACAACTACAAGTGCAAATAAGTATGGCCAAGGAGGCAATAGCAACACTTGAAGCCAGTGATGTAGAAGGTAGAGAACTAAATACAAGGAGCTCTAGCATGAATGAATTGGAGATTGAATTACCAAATAACACAAATGCAATAGCAGAAAGCAGAGGAATTAAATCAGATGATGAAGACATTGATTCCAATTTCAAATATGTGAAACATGTTCTTGAGTATCTAGGCCTCATGGGAAATGAGGAGAACATTGTTCAACTAATTAAGCCATCCTTGCTCATGGATTTCGATACATCTTGGTTCCATGAAATTGAATCCAATGGAGAAGATAGTGTCAGATCCAACCATCATCATCATCACCTTCTTCTTTCTAACATAGTAAAAGAGGTGCTGCTCCAAATATATGAGACATCATCATCAACTTACATCACAATAATGCATAAGGGGCAACAACATCTTCTTAATGAAGTATGGATTAGAGTTAACTTATACCTGAGATTGAGGCCAGAGCTAGATCAGACATTAGATGATGTTGTTGGTCGAGATTTGGCCAAAAACAATGGCTGGATGATCCTCAAGCATGAAGAGGAGTGTGTAGCGCTTGAACTAGAAGAGAATATTTTCAAAGATTTAGTAGATGAAATAATCTTCACATGA 2187 0.3768 MGKKHSLSCMKTSATVEFHQENNDEGPRCMWGMLHILDYHHWLNIRNVFPLKKHHYPSRLATYKRINILHSHWGDQQIGDEETEPLLQARQHEQKCSAKGKSSSKSRNKRSQTENSKGWIISFHGESKNLGSSHKFVQSKAHNTKEGVLDQSLMEANKLHRDTPVNSKRYSDSLEVLGVEKDLILKYLHDLHVGGENLQLQLAFNKKASLKKSGSVHQTSQVRSIISPTTFEHKQSEIWPFDKKNKLLHSTQALKTFASIKQKQRFSSSSSNPQGLNHKGWNQLVLHRFKVIKQKIKHALKEFKKSGYQTSVEAIHHHRASSEYGITNTENGISDENKYFCFDSSRHEFCGCKRRKSSLNGESIDRYTQLFEQSFGKDIKCHGSMSKSLKFPNEDKDNSMSLCQCPPKASRRDLSLPNLDSFNFLILHEALSVANDIHVQRKPVRLPLNKDISLDHITETEMEEAMDIRGNDANAAPLSDKTMETNDGELEDDVSSDTHELALEDGSFLQEQLQVQISMAKEAIATLEASDVEGRELNTRSSSMNELEIELPNNTNAIAESRGIKSDDEDIDSNFKYVKHVLEYLGLMGNEENIVQLIKPSLLMDFDTSWFHEIESNGEDSVRSNHHHHHLLLSNIVKEVLLQIYETSSSTYITIMHKGQQHLLNEVWIRVNLYLRLRPELDQTLDDVVGRDLAKNNGWMILKHEEECVALELEENIFKDLVDEIIFT 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00477 728 PANTHER PROTEIN TRM32 21 727 IPR044257 -
Aip03g00477 728 Coils Coil 510 530 - -
Aip03g00477 728 Pfam Domain of unknown function (DUF4378) 575 724 IPR025486 -
Aip03g00477 728 MobiDBLite consensus disorder prediction 91 118 - -
Aip03g00477 728 PANTHER PROTEIN TRM32 21 727 - -
Aip03g00477 728 MobiDBLite consensus disorder prediction 472 492 - -
Aip03g00477 728 Pfam Protein of unknown function (DUF3741) 150 190 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00477 Aip-Chr3 4647857 4651331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00477 163 718 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 25.464 3.07e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00477 - - aip:107629102 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00477 03 4647857 4651331 Aip03g00477 03 4647857 4651331 ECH