Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00476 ATGGGAAACGGCATAGGGAAGCTGACGGTGTGCTTCACCGGAAGCGGCGGAGGTGGAGGGCGCCGCCGCAAGCACGACATATCCATCGTATTAACAGAGCCACTAGACGAGGGTCTGGGACACTCGTTCTGCTATGTTAGGCCCGACCCGACCCGAATATCATCTTCGAAGGTTCACTCGGAAGAAACCACCACTTTCAGAACAATCTCCGGCGCGTCCGTGAGCGCCAACACATCGACGCCACTCTCAACTTCCTTTGTGGATCTCTACTCATACGGTTGCATCGATAGAGCTGCGGCTTTCGAGAGCTCAACCTCTTTCGCCGCGCTTCCTCTTCAACCCATTCCAAAGGGCTTCACCAATTCGGGTCCATTTTCCGGTAACTTAAACGGGTTTCCAGCATCGGGTCCTCTCGAGAGAGGCTTCATGTCAGGCCCGATTGAGCGTGGATTTATGTCGGGCCCAATCGACCGGGCCGGGATCTTCTCCGGCCCGATGGATAGAGACAGTTCCGATCAGTTTCAGAGAAGCTTCTCTCATGGCGGTTTGATTTCGGGTATTGGGATTCGACCCGGAACGAGGAAGACCCGGTGGATTCGGGTGCTGCGGAGGGCGATTTCGAAGACCCTTCGGCAAGGTTCGATCGTGGCTCCGATCAAAGGGGTGGCGCCGGCGGGAAGGGAGCCACCGGAGTGGGTTATTGCGGCAGCGGAGAAGCAGAACGAGAACACGGTTAACAGCGTGAATTTCAGCAGCGAAGGGAGCTTCTTGGAGGACGATGATTCAACGACGGCGGCGATGGAAGGTCACCAGAACGTTCAGTGGTGTCAGGGAAAAGCAGGGGAGGACCGTGTCCACGTGGTGGTGTCGGAGGAACACGGTTGGGTGTTCGTGGGGATCTATGATGGATTCAACGGCCCAGATGCGCCTGATTACTTGCTTTCGAATCTGTACAACGCAGTGCACAAGGAGCTCAAGGGTTTGCTTTGGGATGATGGGGTTGATGGGAATTCCAATTTGGGGGTTAAAGATTCGATCTTGACAACTGGGGATGATGATGGCGATGCTTGTGCTGGCTGTGTTGATCAACAGAATAATAATAATATGAATGATGAAGATGGGTCATCTTGTGCTGCAAGTGGTGCTGGGGATTCTAATTTTGATGATCATGGTTTGAAGAGAAAAAAGCGTGGTGGAAATGGAAATGGAAATGGAAGTGGAAGGAGTTCTAAGAACAAGTACAGAGGCGCTGCAAAGAAATGGGAGGAGAATCAGATGAGGTGGAAGTGCGAGTGGGACAGGAAAAGAGTGAAACTTGATCGGAGATTGAAGGAGCAGCTAACTGGATCCGATGGGTCCATGATGGTGAACCATTCCGATGTGTTGGAAGCTCTGTCTCGGGCTCTTAGGAAGACGGAGGAGGCTTTCTTAGACGTGGCGGATAAGATGGTGATGGAGAATCCTGAGCTTGCTCTAATGGGGTCTTGTGTTCTTGTGATGTTGATGAAAGGTGAAGATGTTTATGTGATGAATGTTGGAGATAGTAGAGCTGTTCTTGCTCAGAAGGCTGAGCCTGATTACTGGCTTGGCAAGATTAGGCAGGACTTGGAGAGGATCAATGAGGAGACCATGAATGATCTCGAATCCTGGGACGTCGATCGATCCACCTTGGTCCCTACTCTCACCTCCATTCAGCTCACCAAGGATCACAGCACCAACGTTGATGAGGAAATCCAAAGAATAAGAAAAGAGCACCCCGATGATCCCTTCGCGCTTGTAAATGAGCGCGTTAAGGGATCTCTCAAGGTTACTCGGGCATTTGGTGCCGGATTTCTCAAACAGCCCAAGTGGAACAATGCATTGTTGGAGATGTTTAGAATAGACTATGTGGGAAGTTGTCCTTACATAAGTTGCTTGCCATATCTAAAACACCATAGATTAGGACCAAAGGACAAGTTTTTGATTCTGTGTTCAGATGGCTTGTACCAATACTTGTCAAACGAAGAAGCAGTTGCTGAAGTTGAACTTTTCATCACATTGCAACCTGAAGGAGACCCTGCTCAGCATTTGGTTGAGGAAGTCCTATTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTTCACCAATTGCTTGAAATTCCACAAGGTGATAGACGTCGATACCATGATGATGTCTCCATCATTGTTATTTCTTTGGAAGGAAGGATATGGAGATCATGGGTATAA 2223 0.4984 MGNGIGKLTVCFTGSGGGGGRRRKHDISIVLTEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTSFVDLYSYGCIDRAAAFESSTSFAALPLQPIPKGFTNSGPFSGNLNGFPASGPLERGFMSGPIERGFMSGPIDRAGIFSGPMDRDSSDQFQRSFSHGGLISGIGIRPGTRKTRWIRVLRRAISKTLRQGSIVAPIKGVAPAGREPPEWVIAAAEKQNENTVNSVNFSSEGSFLEDDDSTTAAMEGHQNVQWCQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYNAVHKELKGLLWDDGVDGNSNLGVKDSILTTGDDDGDACAGCVDQQNNNNMNDEDGSSCAASGAGDSNFDDHGLKRKKRGGNGNGNGSGRSSKNKYRGAAKKWEENQMRWKCEWDRKRVKLDRRLKEQLTGSDGSMMVNHSDVLEALSRALRKTEEAFLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDRSTLVPTLTSIQLTKDHSTNVDEEIQRIRKEHPDDPFALVNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGSCPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHQLLEIPQGDRRRYHDDVSIIVISLEGRIWRSWV 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00476 740 Gene3D - 237 736 IPR036457 -
Aip03g00476 740 ProSiteProfiles PPM-type phosphatase domain profile. 264 731 IPR001932 -
Aip03g00476 740 SMART PP2C_4 264 729 IPR001932 -
Aip03g00476 740 Coils Coil 455 475 - -
Aip03g00476 740 Pfam Protein phosphatase 2C 453 687 IPR001932 -
Aip03g00476 740 MobiDBLite consensus disorder prediction 388 420 - -
Aip03g00476 740 PANTHER PROTEIN PHOSPHATASE 2C 19 740 IPR015655 GO:0004722|GO:0006470
Aip03g00476 740 SUPERFAMILY PP2C-like 278 732 IPR036457 -
Aip03g00476 740 CDD PP2Cc 457 731 IPR001932 -
Aip03g00476 740 PANTHER - 19 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00476 Aip-Chr3 4632155 4635376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00476 1 740 PP2C-type Phosphatase Gene Family AT1G07630 64.456 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00476 - - aip:107629103 1434.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00476 03 4632155 4635376 Aip03g00476 03 4632155 4635376 ECH