Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g00469 | atgcttgagcttcgaaaccaccatagccgacctcgtctcctgcctccgtcgcgcagccattgtcccgccggcgccaactctgttccaccgcACTTGAATCGTGCTCTTATCCCTCGCAACACTTTCAAAGCCACGCTTCACTTAAGGGACACTCTTCAAGCCGCCAAGGATTTCCTCACCTTCGCTGCTCATTGCAGTAAGATTTTCATGGTTCTTGAGAGGGACCAAATTATGACTAAGTTCTATGAGGTCTCGGCTAGGTTGGAGCAGTCTTTGGCGGCGGTTTCATGTGATCAACTCGACATTTCAGATGAAGTTAAGGAGCAGGTTGAGCTAGTTCTTGCTCAGTTCAGAAGAGCAAAAGGGAGGGTTGATGAACCTGATACCAAGTTGTATGAGGATGTGTTGTCCCTCTATAACAATAACACTGATGTAGCTACCAATCCAGATGTTTTTCGGCAGTTAGCAGAGAAGTTGGAATTGATGGGAATAACTGATCTCACACAAGAGTCACTTGCGCTGCACGAGATGGTGGCCGCAAGTGGTGGCGATCCGGCCGGACGCATTGAGAAGATGTCCATGCTATTGAAGAAGATAAAAGATTTTGTTCAAACTGAAAATCTAGTTGTGTATGATACTGTAGGAGGAAAGGACCATTCTTCAAAAACCAGCAAACAAGTCACAAATGAAAGGAATCATCAGACGCCTGTTATCCCTGATGATTTTCGATGTCCTGTTTCTCTTGAATTGATGAAGGATCCTGTCATTGTTTCAACAGGACAGACTTATGACCGTTCTTCTATTGAGAAGTGGTTAGAAGCAGGGCATGGTACATGCCCAAAAACACAGCAGAGCCTCACTAGTACCGTCCTCACACCCAACTATGTCTTGCGAAGCCTCATAGAACAATGGTGCGAAGCAAATGGCATGGAACCACCGAGACGACCAAGCAATTCCGAACCTAGTAAATCAGTGTCGGCTTATGCCCCGGCCGAGCGAAGCAAGATTGAAACTCTTCTCCAAAGGCTGACTTGTGGCAGTCCAGAAGAGCGAAGAACAGCTGCAGGGGAGATCCGGCTTCTTGCAAAGCGCAATGCAGATAACCGTGTAGCCATTGCAGAAGCCGGTGCAATACCTCTCCTTGTTGGTCTCCTCTCTGTGCCTGATTCCCGCACTCAAGAGAATGCTGTTACCGCACTTCTGAATCTTTCCATATATGAAAACAACAAAGGAAGCATTGTATCTTCAGGGGCAATTCCAGGCATAGTTCATGTGCTCAAGAAGGGAAGCATGGAAGCTCGAGAAAATGCAGCAGCAACACTTTTCAGCCTATCAGTTATTGATGAAAACAAGGTTACAATTGGTGCTTCAGGAGCCATACCTCCATTAGTAACACTTCTAAGTGAGGGTACTCAGAGGGGTAAGAAAGATGCTGCAACAGCACTCTTTAATCTATGCATTTATCAAGGGAACAAGGGAAAGGCAATCAGGGCCGGTGCCATTCCCACATTGATGAAACTTGTAACAGAACCCAATGGAAGCATGGTGGATGAAGCGTTGGCCATTTTGGCAATATTGTCTAGCCATCCAGATGGAAAAGCTGCCATTGGTGCTGCAGAGGCAGTGCCCTTTTTGGTACAGTTTATTGCAAATGGTTCACCCAGGAACAAAGAAAATGCGGCTGCTGTCTTGGTTCATCTTTCTTCTGGAGATCAACAATATCTGGCTCAGGCCCGAGAGCTCGGTGTGATGGATCCTTTGTTGGATTTGGCTCAAAATGGCACAGATAGAGGAAAAAGGAAGGCAGCACAATTGCTAGAACGCATGAGCAGGTTCCTTGAGCAGCAGACTCAAACTGAACTGCACCATGTTGCACATACCAGCATTGATAATACCTGA | 1899 | 0.4381 | MLELRNHHSRPRLLPPSRSHCPAGANSVPPHLNRALIPRNTFKATLHLRDTLQAAKDFLTFAAHCSKIFMVLERDQIMTKFYEVSARLEQSLAAVSCDQLDISDEVKEQVELVLAQFRRAKGRVDEPDTKLYEDVLSLYNNNTDVATNPDVFRQLAEKLELMGITDLTQESLALHEMVAASGGDPAGRIEKMSMLLKKIKDFVQTENLVVYDTVGGKDHSSKTSKQVTNERNHQTPVIPDDFRCPVSLELMKDPVIVSTGQTYDRSSIEKWLEAGHGTCPKTQQSLTSTVLTPNYVLRSLIEQWCEANGMEPPRRPSNSEPSKSVSAYAPAERSKIETLLQRLTCGSPEERRTAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQENAVTALLNLSIYENNKGSIVSSGAIPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAIRAGAIPTLMKLVTEPNGSMVDEALAILAILSSHPDGKAAIGAAEAVPFLVQFIANGSPRNKENAAAVLVHLSSGDQQYLAQARELGVMDPLLDLAQNGTDRGKRKAAQLLERMSRFLEQQTQTELHHVAHTSIDNT | 632 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g00469 | 632 | SMART | Ubox_2 | 241 | 304 | IPR003613 | GO:0004842|GO:0016567 | |
Aip03g00469 | 632 | Pfam | U-box domain | 238 | 308 | IPR003613 | GO:0004842|GO:0016567 | |
Aip03g00469 | 632 | Pfam | Armadillo/beta-catenin-like repeat | 365 | 404 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | Pfam | Armadillo/beta-catenin-like repeat | 448 | 486 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | ProSiteProfiles | U-box domain profile. | 237 | 311 | IPR003613 | GO:0004842|GO:0016567 | |
Aip03g00469 | 632 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Aip03g00469 | 632 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 458 | 500 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | Pfam | Neurochondrin | 498 | 618 | IPR008709 | - | |
Aip03g00469 | 632 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 376 | 418 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | SUPERFAMILY | ARM repeat | 336 | 615 | IPR016024 | - | |
Aip03g00469 | 632 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 238 | 311 | IPR013083 | - | |
Aip03g00469 | 632 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 499 | 541 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | CDD | RING-Ubox_PUB | 242 | 284 | IPR045210 | - | |
Aip03g00469 | 632 | MobiDBLite | consensus disorder prediction | 308 | 330 | - | - | |
Aip03g00469 | 632 | MobiDBLite | consensus disorder prediction | 218 | 239 | - | - | |
Aip03g00469 | 632 | SMART | arm_5 | 447 | 487 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | SMART | arm_5 | 529 | 569 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | SMART | arm_5 | 571 | 611 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | SMART | arm_5 | 488 | 528 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | SMART | arm_5 | 406 | 446 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | SMART | arm_5 | 365 | 405 | IPR000225 | GO:0005515 | |
Aip03g00469 | 632 | PANTHER | U BOX DOMAIN-CONTAINING | 35 | 622 | - | - | |
Aip03g00469 | 632 | SUPERFAMILY | RING/U-box | 226 | 313 | - | - | |
Aip03g00469 | 632 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 35 | 622 | - | - | |
Aip03g00469 | 632 | Gene3D | - | 322 | 630 | IPR011989 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g00469 | Aip-Chr3 | 4567651 | 4570453 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g00469 | 37 | 619 | U-box Gene Family | AT3G46510 | 68.954 | 0.0 | 818 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g00469 | - | - | gmx:100812160 | 917.916 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip03g00469 | 03 | 4567651 | 4570453 | Aip03g00469 | 03 | 4567651 | 4570453 | ECH |