Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00466 ATGGAGGACGGAGGGAGTTCAAGGTGGAACCCTACGAAGGAGCAGATAAGCATGTTGGAGAATCTTTATAAGCAGGGAATAAGAACCCCAAGCGCTGAAGAGATTCAGCAAATAACAGCCAGGTTGAGAGCCTATGGTCACATCGAAGGCAAGAACGTCTTCTACTGGTTTCAGAATCACAAAGCCAGACAGAGGCAGAAGCAGAAGCAACACACTCTTGCTTACTTCAATCGCTCTTTTCTCCATCATCATCATCATCAACCTGCAGTTATGTGTGGTCCGTATTGCATGGTAGGTATGATGAGGAGAATCCCCGATAATAATCATAGTGAAGAAGAAACAATGTTTGATTATGATGATGATGATAAGCAACAAGATAGAACGTTGGATCTTTTCCCTCTTCACCCAACTGGCATCTTGGAAGGGAAGAAGGAAACACAAGATAACAACAACAACAACAACATGATGACCATGATGTGCTCTTTCATGGCGCCTTCTTCTTCATCATCGTCATCACTTTCCACTGATGATGGACATGGCTATAGGCACCAACAACAACAACAACTACCCTTCTTTGATTTCTTCGTCACTTCTGGACATGGACAAGGATCCTAA 615 0.4341 MEDGGSSRWNPTKEQISMLENLYKQGIRTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQHTLAYFNRSFLHHHHHQPAVMCGPYCMVGMMRRIPDNNHSEEETMFDYDDDDKQQDRTLDLFPLHPTGILEGKKETQDNNNNNNMMTMMCSFMAPSSSSSSSLSTDDGHGYRHQQQQQLPFFDFFVTSGHGQGS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00466 204 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Aip03g00466 204 CDD homeodomain 8 68 IPR001356 GO:0003677
Aip03g00466 204 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 111 200 IPR044555 GO:0003700|GO:0099402
Aip03g00466 204 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 98 IPR044555 GO:0003700|GO:0099402
Aip03g00466 204 Gene3D - 6 75 - -
Aip03g00466 204 SUPERFAMILY Homeodomain-like 4 73 IPR009057 -
Aip03g00466 204 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 4 98 - -
Aip03g00466 204 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 111 200 - -
Aip03g00466 204 SMART HOX_1 4 71 IPR001356 GO:0003677
Aip03g00466 204 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00466 Aip-Chr3 4540997 4541910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00466 6 82 Wox Gene Family AT5G59340 84.416 1.07e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aip03g00466 Homeodomain 2.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00466 - - ahf:112736626 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00466 03 4540997 4541910 Aip03g00466 03 4540997 4541910 ECH