Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00464 ATGATTCTTCAGAAGTCTAGAAGCTCAAAGCTTCTCATCAATAATCCTCCATGGCTAAGACACTCATCTCCTCTCCCTCCTTCATCGGAACTCCACTCCCCTCCCTCCACCGCCACCGCTTCCCCCACCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCTACACGCTCGCCGACGCTGCTGTCGCCACCGCCGACTCTGCTGCCACCGCCACCGGGACTTCCACCGATGCCGCCGCCGACACCGTGCAGAAGAACGGAGGCTGGTTCGGATTCATCTCCGAAGCCATGGAGTTTGTTCTCAAGGTGTTAAAGGATGGTCTTTCTGCTGTGCATGTACCTTATGCATATGGATTTGCTATCATATTGCTCACAGTTGTGGTTAAGGCTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAACACTAGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGCTATATAGACAGGCTGGGGTTAACCCATTGGCAGGTTGTTTACCAACATTGGCTACAATTCCAGTATGGATTGGTCTTTACCAAGCTTTATCAAATGTTGCAAATGAGGGATTGTTAACAGAAGGTTTCTTTTGGATCCCATCTCTTGGAGGTCCTACTACCATAGCTGCTAGACAAAGTGGAGCTGGAATTTCTTGGCTTTTCCCTTTTGTGGATGGTCATCCACCATTGGGTTGGCAGGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTGTTGTTTCTCAATACGTCTCCATGGAAGTCATGAAGCCACCTCAGACGAATGATCCTACCCAAAAGAATACACTTCTTATTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCTCTCTCTCTGTTCCATCCGGGCTAACAATTTACTGGTTTACAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAACCTGTTGTAGATGAAAATGCTGGTGGAATTATCACAGCAGGACGTGCTAAAAGATCAGCTTCCCAGCCAGCTAAAGCTGGTGAAAGATTTAGGCAGTTAAAAGAAGAGGACAAAAAGAAAAAGTCAAGCAAGGCACTACCAGTGGAAGAAGTTCAACCTTTGGCATCTACTACTGATTCTGATGATGGCTCAGATGAAGAGAGTAACAAGGGATCAGAAGCTGCACAAGAAGAAGCATATGCCTTATAG 1299 0.4326 MILQKSRSSKLLINNPPWLRHSSPLPPSSELHSPPSTATASPTAXXXXXXXXXXXXXXXXXXXXXXXLYTLADAAVATADSAATATGTSTDAAADTVQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVVVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEVMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKPVVDENAGGIITAGRAKRSASQPAKAGERFRQLKEEDKKKKSSKALPVEEVQPLASTTDSDDGSDEESNKGSEAAQEEAYAL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00464 432 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 131 344 IPR028055 -
Aip03g00464 432 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 66 431 - -
Aip03g00464 432 Pfam 60Kd inner membrane protein 131 345 IPR001708 GO:0016021|GO:0032977
Aip03g00464 432 MobiDBLite consensus disorder prediction 13 50 - -
Aip03g00464 432 MobiDBLite consensus disorder prediction 372 396 - -
Aip03g00464 432 PANTHER OXA1 66 431 IPR001708 GO:0016021|GO:0032977
Aip03g00464 432 MobiDBLite consensus disorder prediction 364 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00464 Aip-Chr3 4525584 4532239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00464 68 401 Chloroplast and Mitochondria Gene Families AT2G28800 73.653 2.91e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00464 K03217 - gmx:100813782 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00464 03 4525584 4532239 Aip03g00464 03 4525584 4532239 ECH