Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00445 ATGTCTTTTCAAAATAAGGGGTTTTGGACGGTAAAGGGTTCAGGACACATTAATGACAGAGAGACAACTTTTGATAATCCTTCCAAAGTTGAACCAAAACGACCTCATCAGTGGTTTGTTGATTCTGCTGAAGTGGATCTTTTTCCAAACAAGAAGCAAGCAGTAGAAGATGTAAATGGAAAATCAAGTTCAGGATTTTCAAATGTCAATTATCCTCCTTGGGACAACAGCTCTGGTTTTTCAGTATCAAATATTGTTGATCAGTTATTTGGGTCTGAAACCAGGCAGGTCAATGTCATTGAAAAGAATGTTTATGTTCCAGCTGGTAGCTCTAATGTCAGATCAAGGGCAATGACTAATCAGTATGGGGACAATTCCTCTATTGGCTTGTCTATCTCTCATTCAGTTGAAAATTCGGAAGCACCTCTAAATTATGGTGGAGTTAAAAAAGTTAAAGTAAGTCAGGTTAAGGATATTGATGGTGTACGACATCATCCTGAGGGACTTAATTACAATATGCAAAGCAATGGTGATCTACATCAGGTCTATGGTGGGGAAATTGATAAGGATGGTAATGTAACTTTAATGGGTCTTGCCTATAACGGAGGGGATGTTCATGTGAGATCTTCTGGTGCCCCCTATGGCAAAGGAGGTGACACAGGCATGTCATTTGGTACTGATTCCTATAGCAAAGATAACCCAAATGTGATTCCATTTGGCGGGTTCCCGGATGAACGGGGTATTATCCCTGCTGGTAGGCCTGCTGCAGATTATGGTCAATTATATAATCAATCTTCAGTCCATATTCCAGGAGCAGGTCATGAGAAAGAGTTGGATGCATCAAATCCTGGTGCAGTTGCAAATACTCCTCAAGTAGTAAAACAAAAGTCTGAAACTGTGTCCAAGAATAAACAAGAGTCCAAAGCAAACAAGAAAGAATCTCCAAACAGCTTCCCAACTAATGTCAGGAGCTTGATATCTACTGGTATGCTGGATGGTGTTCCTGTAAAGTATGTGTCGGCGGCCCGTGAGGAACTTCGTGGAATTATAAAAGGATCTGGCTATCTTTGTGGGTGTAAGAAATGCAACTATTCGAAGGCTCTGAATGCATATGAGTTTGAGAGACATGCTAATTGCAAATCAAAACATCCAAACAATCACATTTATTTTGATAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAAGAGTACCCCTGAAAGTATGTTGTTTGATACAATTCAAACTGTCTTTGGTGCACCAATTAATCAGAAAGCATTTCGCTATTGGAAAGAATCTTACCAAGCAGCAACGCGTGAGCTTCAGCGCATTTATGGAAAAGAATAA 1350 0.397 MSFQNKGFWTVKGSGHINDRETTFDNPSKVEPKRPHQWFVDSAEVDLFPNKKQAVEDVNGKSSSGFSNVNYPPWDNSSGFSVSNIVDQLFGSETRQVNVIEKNVYVPAGSSNVRSRAMTNQYGDNSSIGLSISHSVENSEAPLNYGGVKKVKVSQVKDIDGVRHHPEGLNYNMQSNGDLHQVYGGEIDKDGNVTLMGLAYNGGDVHVRSSGAPYGKGGDTGMSFGTDSYSKDNPNVIPFGGFPDERGIIPAGRPAADYGQLYNQSSVHIPGAGHEKELDASNPGAVANTPQVVKQKSETVSKNKQESKANKKESPNSFPTNVRSLISTGMLDGVPVKYVSAAREELRGIIKGSGYLCGCKKCNYSKALNAYEFERHANCKSKHPNNHIYFDNGKTIYQIVQELKSTPESMLFDTIQTVFGAPINQKAFRYWKESYQAATRELQRIYGKE 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00445 449 PANTHER AUTOIMMUNE REGULATOR 1 449 - -
Aip03g00445 449 MobiDBLite consensus disorder prediction 284 298 - -
Aip03g00445 449 Pfam Tify domain binding domain 348 403 IPR032308 -
Aip03g00445 449 MobiDBLite consensus disorder prediction 272 321 - -
Aip03g00445 449 PANTHER DNA-BINDING PROTEIN 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00445 Aip-Chr3 4392035 4394484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00445 308 436 PHD Transcription Factor Family AT3G53680 50.000 4.18e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00445 - - gmx:100802229 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00445 03 4392035 4394484 Aip03g00445 03 4392035 4394484 ECH