Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00441 ATGTCTCCCCACGAACAACAACTTGTCATGCACCTTCACTCCAAATGGGGAAATAGGTGGTCAAGAATTGCAAGGAAGTTGCCAGGGCGAACAGACAATGAGATCAAGAACTTTTGGAGGACTCAGATGAGGAAGCAGAAGGCACAGGAGAAGAAGCGTGCACCTGCAACCACCCAATCATCTCCATCATCTTCGTCTACGAGTTACCAGTCCTCATCTTCTTCCAACAAGGATATTGGGGAAGAGAGCTTCTACGACACTGGAGGGCATAATGGTAATAACAACAACATCACTAACACGATGGTGAAAGAAGATGATGGAATAATAATTAATAGTGATAGTAACAATGTTGTTGATGATGATTACTCTATGGATGATATATGGAATGATATCGCCATGTCTGAACAACACAACAACTTTATTTCTTCTTCTTCTTCTTCTTGTTCTTCTCCGTCATGGCATGACTACTACTATTCTTCAGAACCACTGCCACTATGGATGATCATGGATAATCAAGAACAAGAACAAAGTAAAGTCTTATTCCCTTCTTCCTATGAACCACTCTTAACCACTTAA 576 0.4097 MSPHEQQLVMHLHSKWGNRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQEKKRAPATTQSSPSSSSTSYQSSSSSNKDIGEESFYDTGGHNGNNNNITNTMVKEDDGIIINSDSNNVVDDDYSMDDIWNDIAMSEQHNNFISSSSSSCSSPSWHDYYYSSEPLPLWMIMDNQEQEQSKVLFPSSYEPLLTT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00441 191 MobiDBLite consensus disorder prediction 43 99 - -
Aip03g00441 191 Pfam Myb-like DNA-binding domain 2 41 IPR001005 -
Aip03g00441 191 SUPERFAMILY Homeodomain-like 2 47 IPR009057 -
Aip03g00441 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
Aip03g00441 191 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 176 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aip03g00441 191 MobiDBLite consensus disorder prediction 53 99 - -
Aip03g00441 191 SMART sant 1 45 IPR001005 -
Aip03g00441 191 ProSiteProfiles Myb-like domain profile. 1 43 IPR001005 -
Aip03g00441 191 Gene3D - 2 75 - -
Aip03g00441 191 CDD SANT 1 41 IPR001005 -
Aip03g00441 191 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00441 Aip-Chr3 4341232 4342638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00441 1 131 MYB Transcription Factor Family AT3G46130 49.640 3.50e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip03g00441 Myb_DNA-binding 2.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00441 K09422 - gmx:100776886 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00441 03 4341232 4342638 Aip08g00441 08 3378602 3380236 PCT