Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00437 ATGCCGATTTCTAGAATCGCCATTGGAAATGCTTCAGAGTTCAGCCAAGCTGATGCACTTAAGGCTGCACTTGCAGAGTTCATCTCCATGCTTATCTTTGTCTTTGCTGGGGAAGGCTCTGGCATGGCTTATAACAAGCTAACGAACAATGGCGCAGCAACACCAGCTGGTGTAGTGGCGGCTTCTCTGTCCCATGCCTTTGCACTTTTCGTGGCGGTTTCCGTCGGTGCTAACATCTCCGGTGGCCATGTCAACCCTGCCGTCACATTTGGCGCCTTTGTCGGTGGCCACATTACCCTCCTTAGAAGCATTTTGTACTGGATTGCTCAGTTGCTTGGCTCCATTGTTGCTTGCTTGCTCCTTAAATTCGCCACTGGTGGATTGGTTATATTTCTCACCTCTTTTGTTACCATCACCACCACCACCACCACCACCACCACCACCACCAAAAATGGCTTTTCAATGCCAATAATTTCTAATTGCGATGCATGCAAGACTTCTAAGAATCATTCTTTTATCGCTGTCACAACAGGAGAGCTATGCAATCAACAGCACAGGAGCAATAAATCTAAATCCACCCGTGCCATAACTAAACTGATAAACGAAGGAGACGTTCTTACAAGATTTACCGTAGGGCATGATTTTGAATTTGCTGAGATAGAAGCTTTAGTGGACACTGGAAGTGATATAGTGTGGGGACTCAATAAATCCCCACAAAAGCTTCTAACTTGCAAAAATAGAAGTTCCTTATTGTAA 756 0.4537 MPISRIAIGNASEFSQADALKAALAEFISMLIFVFAGEGSGMAYNKLTNNGAATPAGVVAASLSHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSIVACLLLKFATGGLVIFLTSFVTITTTTTTTTTTTKNGFSMPIISNCDACKTSKNHSFIAVTTGELCNQQHRSNKSKSTRAITKLINEGDVLTRFTVGHDFEFAEIEALVDTGSDIVWGLNKSPQKLLTCKNRSSLL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00437 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00437 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00437 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00437 251 Gene3D Glycerol uptake facilitator protein. 4 164 IPR023271 -
Aip03g00437 251 PANTHER AQUAPORIN TIP1-1 1 130 - -
Aip03g00437 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Aip03g00437 251 SUPERFAMILY Aquaporin-like 16 150 IPR023271 -
Aip03g00437 251 Pfam Major intrinsic protein 14 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g00437 251 PANTHER AQUAPORIN-8 1 130 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00437 Aip-Chr3 4308964 4311914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00437 1 128 Major Intrinsic Protein MIP AT4G01470 78.906 5.77e-68 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00437 K09873 - gmx:547794 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00437 03 4308964 4311914 Aip03g00437 03 4308964 4311914 ECH
Aip08g00442 08 3380993 3382341 Aip03g00437 03 4308964 4311914 ECH
Aip08g00442 08 3380993 3382341 Aip03g00437 03 4308964 4311914 PCT