Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00425 ATGCCGAGAAAAGGAATGAGAAGTATCTTCTTCAAACCTTCATCTTCTCATCATCCGCCACGTCACTACTCACTACCACCACCCTCCCCTCTTCGCACCTTCTCCGACACCCTTATGGACGATAACATCCATAAGGCGGAGTCACTTATAACCAAGTGGGATTATAATAATAACAATAATAACTCCGTTAGTTCACGCCTTTCAAACTCTAGCTCACTCTTCAGCGGAACACGCCTGGATGCCAAACACTACATTGACGCCGTCAAGGGCCTACAGTCCGCTATGAAGTACCTCGTCGCACAGGATCCCTCCTCTGCTTATCTTCTTCGAGCACAGTCTCTCATGCAAATCGCAATGAAAACTCTTGAGAGAGAGTTTCACCAGATCCTAAAGGCCAATAGGGAATACCTCGATCCCGAAACCGTTTCTAACCGCTCCGAAACCCTTTCTAACCGTTCTTCAACGGATTTCGGCCAGAACAGTTTCTCCGATTTCGATGAGATTGTTTCCGACGATGAGTTTCGCCTTGCCGGAGAAGGAGTCGCTGATGCCGAGAGAGCTTCCATGCTTGCCGTCAACGATTTGAAAGCAATCGCGGATTGCATGATTTCCACTGGCTACGGAAGAGAGTGCGTTAGGATTTACGTGTTGGTGAGGAAATCGATCGTTGATGAAGCTCTTTACAATCTTGGAGTGGAGCAGTTGAGCTTCTCGCGTCTCCAGAAGATGGATTGGGAGGTGGTTGAGTTGAAGATCAAGCACTGGCTCAATGCGATGAAGGTTGCCGTCGGAACTCTCTTCAACGGTGAGAGGATACTCTGCGATAGTGTCTTCGCTGCCACCGCGCCGGAGAAACGGATCGCGGAGTCTTCCTTCGCTGAGATCACTAGAGACGGCGCCATGATGCTGTTTGGATTCCCGGAAATGGTTGCAAAGTGCAAGAAAACGCCGGAGAAGATGTTCAGGACTCTCGATATGTACGAAGCGATCTCCGAAAACTGGCAGCAGATTGAATCCATCTTCTCCTTCGAATCAACCGCCAAAGTCCGTACGCAGGCGGTTACTTCCTTGGTGAAGCTTGGCGACGCCGTGAGGACGATGCTATCGGACTTTGAATCGGCGATTCAGAAGGAACCGTGCAAGACGACGATTCCCGGCGGTGGAGTACACCCAATCACGGGCTACGTGTTGAACTACATCTCTCTCCTAGCCGATTATAGCGGCGTCCTCGTTGACATAATCGCCGATTATCCACAGTCTCCGATGCCGGAATCTTTCTACCGAAGCCCGATCCACGAGGATAGCACGTCGTCGTCCTTCTCCACGGTTCCGTCGCCGGCGATCTCAGAGCGAATCGCATGGCTGATCCTCGTGGTTCTCTGCAAGCTCGACGTGAAAGCGGAGCGCTACAAGGACGTGGCGCTTTCTTACCTCTTCCTCGCTAACAACATGCATTACGTAGTAGAAAAGGTTCGAAAATCGAACCTAGGGTTGCTCCTCGGTGAAGAGTGGATGGCGAAGCACGAAGCGAAGACGAAGGAATACGTAGCCAAATACGAGCGCGTCGGGTGGAACAGCGTGCTCACTTCGCTGCCGGAGAATCCTGCGGCGGAGATCTCAGCGGAGCAAGCTAAGGCTTGCTTCGTTAGCTTCAACACAGCGTTTCACGAAGCCTGCAAAAAACAAAGCGGGTGGGTTGTACCCGACCCGAAACTGAGAGACGAAATCAAAGTCTCGATAGCTTTGAAGCTGGTTTCCAAGTACGGCGAGTTCTACGATAAGAATAGGGTCGGGTCTGAATCGGCAATACGGTTCTTACCCGACGATATTGGAAACCAATTGTCAGATATTTTGTACGGCATTGGAGAATCGAGTAGTGGCTCGTCGCATGCTTTGACGACGTCGTCTTCACGTCGCTCCAACGGAAGCAGCAGGTGA 1938 0.5114 MPRKGMRSIFFKPSSSHHPPRHYSLPPPSPLRTFSDTLMDDNIHKAESLITKWDYNNNNNNSVSSRLSNSSSLFSGTRLDAKHYIDAVKGLQSAMKYLVAQDPSSAYLLRAQSLMQIAMKTLEREFHQILKANREYLDPETVSNRSETLSNRSSTDFGQNSFSDFDEIVSDDEFRLAGEGVADAERASMLAVNDLKAIADCMISTGYGRECVRIYVLVRKSIVDEALYNLGVEQLSFSRLQKMDWEVVELKIKHWLNAMKVAVGTLFNGERILCDSVFAATAPEKRIAESSFAEITRDGAMMLFGFPEMVAKCKKTPEKMFRTLDMYEAISENWQQIESIFSFESTAKVRTQAVTSLVKLGDAVRTMLSDFESAIQKEPCKTTIPGGGVHPITGYVLNYISLLADYSGVLVDIIADYPQSPMPESFYRSPIHEDSTSSSFSTVPSPAISERIAWLILVVLCKLDVKAERYKDVALSYLFLANNMHYVVEKVRKSNLGLLLGEEWMAKHEAKTKEYVAKYERVGWNSVLTSLPENPAAEISAEQAKACFVSFNTAFHEACKKQSGWVVPDPKLRDEIKVSIALKLVSKYGEFYDKNRVGSESAIRFLPDDIGNQLSDILYGIGESSSGSSHALTTSSSRRSNGSSR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00425 645 Gene3D Exocyst complex component Exo70 65 625 - -
Aip03g00425 645 MobiDBLite consensus disorder prediction 1 25 - -
Aip03g00425 645 MobiDBLite consensus disorder prediction 623 645 - -
Aip03g00425 645 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 624 IPR004140 GO:0000145|GO:0006887
Aip03g00425 645 Pfam Exo70 exocyst complex subunit 253 616 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip03g00425 645 SUPERFAMILY Cullin repeat-like 44 617 IPR016159 -
Aip03g00425 645 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 25 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00425 Aip-Chr3 4220277 4222338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00425 24 620 EXO70 exocyst subunit family AT5G59730 49.429 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00425 K07195 - gmx:100808078 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00425 03 4220277 4222338 Aip03g00425 03 4220277 4222338 ECH