Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00408 ATGCAAATGGAAAAGGAAAACCAAAACGGCGATATCGCACTTGATTCCAAATACGTTCGCTACAACATTCTTGGAAACTTGTTCGACGTTTATGCTCACTACGTTCCTCCCATTCAACCCGTTGGTCGTGGCGCTTACGGCGTCGTTTGCTGCGCGACGAATTCGGAGACCAAAGAAGGTGTTGCCATCAAGAAGATCGGGAATGCCTTTGACAACCGGATCGATGCCAAGAGGACTCTCCGGGAAATCAAGCTCCTCTGTCACATGGACCATGATAATGTGATTAAGATAAAGGATATAATAAGGCCAGCGGAGAGGGAAAAGTTCAATGATGTGTACATAGTTTATGAGCTGATGGACACTGATCTCCATCAGATTATTCAGTCTAACCAGCCTCTCACTGATGATCACTGCCAGTATTTCTTATACCAGCTCTTGAGAGGATTAAAGTATGTACACTCTGCCAATGTTTTGCACCGAGATCTAAAGCCAAGCAATTTACTTCTCAATGCAAACTGTGATCTCAAAATATGTGACTTTGGGCTTGCCAGAACAACATCTGAGACAGATTTTATGACAGAATATGTTGTCACTCGTTGGTACAGAGCCCCTGAATTGCTATTGAACTGTTCAGAATATACTGCAGCGATTGATATCTGGTCTGTTGGATGTATTTTGATGGAAATAATTAGAAGGGAGCCTTTGTTTCCTGGTAAAGATTATGTTCAGCAGTTGGCACTTATAACTGAGTTACTAGGTTCACCAGATGAATCGGATCTTGGATTCCTCAGAAGTGAGAATGCAAAGAAATATGTTAAGCAGCTCCCACATGTAGAAAAGCAGCCATTTGCGCTGAGGTTTCCTGATGTGTCTCCATTGGCAATTGATCTTGCTGAGAAAATGTTGGTCTTTGATCCCTCAAAACGCATAACTGTTGAGGAAGCACTGAATCACCCATATTTGGCAAGCCTTCATGAGATCAATGAGGAGCCCACTTGCCCGAGTCCATTCATCTTTGATTTTGAACAGACAAGTCTGAATGAAGAAGATATAAAGGAGCTCATATGGCAAGAGTCTCTGAACTTCAGCCAGGATCAGATGCTTGAATAA 1110 0.4261 MQMEKENQNGDIALDSKYVRYNILGNLFDVYAHYVPPIQPVGRGAYGVVCCATNSETKEGVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNVIKIKDIIRPAEREKFNDVYIVYELMDTDLHQIIQSNQPLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPDESDLGFLRSENAKKYVKQLPHVEKQPFALRFPDVSPLAIDLAEKMLVFDPSKRITVEEALNHPYLASLHEINEEPTCPSPFIFDFEQTSLNEEDIKELIWQESLNFSQDQMLE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00408 369 ProSitePatterns MAP kinase signature. 70 173 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aip03g00408 369 ProSiteProfiles Protein kinase domain profile. 35 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00408 369 SMART serkin_6 35 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00408 369 Gene3D Phosphorylase Kinase; domain 1 18 358 - -
Aip03g00408 369 CDD STKc_TEY_MAPK 28 363 - -
Aip03g00408 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 13 367 - -
Aip03g00408 369 Pfam Protein kinase domain 39 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00408 369 ProSitePatterns Protein kinases ATP-binding region signature. 41 65 IPR017441 GO:0005524
Aip03g00408 369 SUPERFAMILY Protein kinase-like (PK-like) 38 327 IPR011009 -
Aip03g00408 369 Gene3D Transferase(Phosphotransferase) domain 1 119 348 - -
Aip03g00408 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 367 - -
Aip03g00408 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00408 Aip-Chr3 3973310 3976230 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00408 3 362 MAP Kinase Gene Family AT1G07880 79.167 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aip03g00408 Pkinase 2.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00408 K04371 - gmx:100802929 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00408 03 3973310 3976230 Aip03g00408 03 3973310 3976230 ECH