Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00400 ATGACGCTCGTCCAACTCATCATTCCCGCCGAGTCCGCTCACCGAGCCGTCTCCTATCTCGGCGAACTCGGCCTCCTCCAATTCCGAGACTTAAATGCTGAGAAAAGTCCCTTTCAGAGAACGTTTGTTAACCAGGTGAAGCGATGTGCAGAAATTTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAGTAAAGCTGGTGTAGTATCTTCTGATCCAGTAATGCAGCCAGATATTCACTTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGTGCTAACTGAAATGAATTCTAACAGTGAGAAACTTCAGCAATCATATATGGAACTCTTGGAGTTCAAAGTTGTATTGCAAAAGGCATCTGCTGTTCTATTTTCAAATCATGGCCATGCTGTTCCAGAAGAGAGAGAACTAGAGGAGAATATTAACTCAAAAGGAGATTATGTTGAGACACCATTTTTGTTTGAACAGGAAACGAGTATGGAGCCAACAAATCAATCTGGTTTAAGATTTATCAGCGGCACAATTTGTAAATCCAAAGTTCTTAACTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAACATGCTGTTCAATCAGGAACCAGCTGATGACCAACTCATGGATCCTATTTCAAATGAGATGATAGAGAAAGCAGTATTTGTGGTGCTTTTCTCTGGGGAGCGAGCAAGAACAAAGATTCTGAAAATTTGTGAGGCGTTTGGGGCACATAGTTACCCTGTCCCTGAAGATATAAGTAAACAGAGGCAGATAATTAACGAGGTTTCATCACGTCTTGCTGACATAGAAGCTACTTTGGATGCTGGGACTAGGCACCGGAATAAGGCTCTAGCTTCTGTAGGAGATAATGTTGAAAAATGGATGGACATGGTAAGAAGAGAGAAAGCCGTCTATGATACGTTGAACATGCTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGGGAAGGATGGTGCCCTATATCTGCAACAGCACAGATTCAGGAGGCATTGCAACGTGCAACTTTTGATAGCAATTCACTAGTTGGCATAATCTTTCATTCAATGGATGCACTGGAATCTCCGCCTACATATTTTAGGACCAACAATTTCACAAGCCCATATCAGGAAATCGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCGAATCCTGCAGTTTACACGGTTATTACATTCCCATTTCTTTTCGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTATTGCTTGGAGCATTAGTCCTTATAGCATGTGAAAAAAAGCTCAGCGCTCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGCTTCTTTTAATGTCATTATTTTCAATCTACTGTGGGTTAATCTACAATGAATTTTTCTGTGTTCCTTTTCACATATTTGGAGCGTCGGCTTACAAATGCCGAGATAATTCATGCAGGGATGCGCATACCATTGGTTTAGTCAAATATCGAGAAACATACCCATTTGGTGTGGATCCCAGATGGCGTGGAAGTCGTTCAGAATTGGCTTTCCTTAACTCCCTCAAGATGAAGATGTCCATTCTACTTGGTGTGGTGCATATGAACTTAGGAATTCTGTTGAGTTATTTCAACGCTTGTTTTTTTGGTAACTCAATAGATATAAGGTACCAGTTTGTGCCACAAATGATTTTCCTCAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGCTCACAAGCGGACCTCTATCATGTAATGATTTACATGTTTTTAAGCCCGTTTGAGAAACTTGGTGAGAATCAGTTATTCTGGGGCCAAGGGGTACTTCAAGTAGTTTTGTTACTTTCTGCTCTAATTGCAGTTCCTTGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTTATGATGAGGTGCCACTTTTGCTTTCAGATGAGGTCTTTGTCCACCAAATGATTCACGCCATTGAGTTTGTTCTAGGCTCAGTTTCAAATACAGCATCTTATCTTCGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCAACTGTTTTTTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGAAAATCTCATCATTCGGATAATAGGGCTAGTTGTTTTTGCCTTTGCAACTGCCTTTATACTACTCATGATGGAGAGTCTGAGTGCGTTTCTTCATGCCCTGCGTCTTCATTGGGTAGAATTTCAAAATAAATTCTACTATGGCGATGGCTACAAGTTCAAACCTTTTTCCTTTGCCTCCTTAATAGATGATGAAAATTGA 2322 0.4083 MTLVQLIIPAESAHRAVSYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEISRKLRFFKDQISKAGVVSSDPVMQPDIHLEDLEIQLAEHEHVLTEMNSNSEKLQQSYMELLEFKVVLQKASAVLFSNHGHAVPEERELEENINSKGDYVETPFLFEQETSMEPTNQSGLRFISGTICKSKVLNFERMLFRATRGNMLFNQEPADDQLMDPISNEMIEKAVFVVLFSGERARTKILKICEAFGAHSYPVPEDISKQRQIINEVSSRLADIEATLDAGTRHRNKALASVGDNVEKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPISATAQIQEALQRATFDSNSLVGIIFHSMDALESPPTYFRTNNFTSPYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIACEKKLSAQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFCVPFHIFGASAYKCRDNSCRDAHTIGLVKYRETYPFGVDPRWRGSRSELAFLNSLKMKMSILLGVVHMNLGILLSYFNACFFGNSIDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFEKLGENQLFWGQGVLQVVLLLSALIAVPWMLFPKPFILKKLYDEVPLLLSDEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYENLIIRIIGLVVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYYGDGYKFKPFSFASLIDDEN 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00400 773 PANTHER VACUOLAR PROTON ATPASES 1 648 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip03g00400 773 PIRSF ATP6V0A1 1 649 IPR026028 GO:0000220|GO:0046961
Aip03g00400 773 PIRSF ATP6V0A1 653 773 IPR026028 GO:0000220|GO:0046961
Aip03g00400 773 Coils Coil 81 108 - -
Aip03g00400 773 PANTHER VACUOLAR PROTON ATPASE A1 655 772 - -
Aip03g00400 773 PANTHER VACUOLAR PROTON ATPASE A1 1 648 - -
Aip03g00400 773 PANTHER VACUOLAR PROTON ATPASES 655 772 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip03g00400 773 Pfam V-type ATPase 116kDa subunit family 19 644 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip03g00400 773 Pfam V-type ATPase 116kDa subunit family 655 765 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00400 Aip-Chr3 3856432 3864042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00400 1 766 Primary Pumps ATPases(2) AT2G28520 73.526 0.0 1182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00400 K02154 - gmx:100800799 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00482 08 3791500 3799395 Aip03g00400 03 3856432 3864042 PCT