Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00328 ATGAAAACCGTTCCGACAACTCCAATCGCCAGGAACCGGAGGTCCGAGCGTCTCGAGAAGAAGACGCCGCCGCCGTCTTCAGCTGCTCCGGCGCCAGCGAGAGGGAGTTCCGATCTGAAGAAGGTCGAGAAGTCTGCCTCGCTAGTGCCGACTCCTTTGAGGAGATCTGGGAGGCTTTCCTCTTCTGGTTCTCCTTCCAAAGGCTCCAATTCGAAGAGCTTTGGGTCTTGTTCTACAGAGGAGAAACGGAAGTGTGTGAAGCGGTTGAGAGCTCAAGAAGAAGAAGAAGAAGAGATGGAGGAAGGTAGTGAGAAAGAGGAACGTGCAGGAAGCGATTCTAAGGTTAACAAGAAGAGATTGCATGCGCGTGTATATCGGGCTTCGTTAAAATCTAAAGGAGATTTTTGTGGGGAATCAAATAAGATGGATAAGTCAACTCAGGAAGGTGATAAGGATAGTGGTAGCAAGACGGAAAATGATAGTGTAGTGCCATCTGGAGATGACAAAGCAAAAGAGATGATAGCCGAGTCTAGGTTTAGTGATCCTGTGGAAGACTTATTATTGGAAAATAATGTGGCTCCATGTGGTGCTACAACTGATGAGGCTAGGTTGGCATCTGAATCGAATCAGTCTGATTGCCGTGGAGAGGAGACACCAGAGACAGCAGTGTCAAGGAATACGAAGAGATCCCAGTCTAGGTTGAGTGGGCCTCCAGAAGGACTATCAGAAAAAAATGCATCTAGTGCAGCGCCTCAAAGTGCGCCTCAAAGTGATCACTCTGATTGCAATGGGAACGAGACATCACCGATAAGGAATTCTGTTTTCAATGAAAGTTTGATTCAGAAACGTGTTAGCCATGATAGGGGTGAAAATTTGATACCCTCAAAGAGAAAGGGGACCATGGTGGACATGCATTCAGATGTTTCTGCTACATCGGTTGATGATGAAAACTGCAACTTGGCTGTGGATGCTGACCCTTCAAAGCTGTGTGGTAGTACTGGAGGGACCAATGGACCATGCTCTAAAAGGATAAGGCGGATCTCTTTATCAGATGTGCAAAGCGATCAAAGGAAATTGATCAGTAACGTTGACCAGCTTTCTCCAGGAGTTGATGGTGTAAAGCTATCTTCTCGAGACAAGGAAGGCAAATCTCAAGGTAATGATGCTGAATATATAAGGAAACAACAGAGGTGCTTAATACTTCTACTGCAGCCGGAGATAGCAAAGCTTTGTGAACTTCTTCTTTTACCAGACAATGTCAAGAAAATGGCTGATTCTTGTCTTCAATATGTTCTGAACAATCGTCAAATCTGTACAAAACCAGTCTCAATATTGCAGGCCTTTCAATTATCTTTGTGTTGGACTGCTGCTTCTTTGCTAAAGCATAAACTTGATTTTGAAGCTTCCATCAAGCTTGCAAAGCAGCATTTGAATTTCACCTGTAAAAAAGAAATGGTGGATGAAATTTATTCAATGCTGTTGGGACTGAGAGAAGAGATTTTATCCCACATTTGTGGCATCATTGATTCTTCAAAAGCTCCTGAATCATCAAACCGGGTTTATTCCTATAGTGAAGTGGCACCGGTAGTTGATTCAGCCAACAAAGATACTCCGGAAAGTACTAAAGAAATTCCAGTGTGTGAAAACCAGGAGGGGAACATACATCTGATGCTACAGGAAGAAAAACAAAAGCTTAAAGCAGCTATGGAGAAAGAGAAGACTGAATTTGAGAGAAGGGTTAAACTCCAGTGGGCAGCTATTCGATGTTGTTCTCCTAATGATGTGACGAGGAGCGAAAAACTCAAGCTTTTCACTAGTGAGTATGAAAAAAGAGTACGAGAATTAAACCGGCAGCATGAAATTCGTCTCAAGGATCTTGAGGCCAAACAATTAAAATCATTGCAGAAACCCAATATAGTTGAAGCCATATCAAGGCCAGGATCCGAGGTTGGATTATCTAAGTCTCCTGACAATTCCGTTGCATTCCCAGCAGATACTCTCTCTAAGCCTTGGTATTCTAGAGAACAATGTTCTGGTGGAGCCACAAGCGCAGAAGATGAAGCACAAGGGAGTGAAAAAGTTAGTTGTGAATCTCGTAATGGAGAGATATGTGATCAGGAAACATCAGATGTTCCCAATGGAGAGGCAGCTCTTTCTATGTGTAAATTCAACAATCTGAATGATGATCAAGATGAAGTTCCTCCTTCCTTGAATTCACAATCATCTTCAGAGCATGTCCCATGTTTACCTACCACTAGCATGGTAAGTTGTAAGGAAGCTACAGTAGCTGATGAGAGCAATGTTTCAATAAATGTGGAGACTCCAAATTTGCCTTCATCTGATGAAGGAATTGCCTCTTTGAATTTAAGATCACCTCAAAACTGTGCCTATAGTCTAAATGAATTGTGTTTGCAAAGTTCTGAGAAATCTGCACAAACTTGCAAGGCTGTTGATGGCAATGGTTCAAACAATGCTGTGTCTCAGAATTCACGTTTAACTGACGAGAGAATTGCTGCTGGCACCACAGTAGGTGTCCCAGATGGAGAAGCACATGTGGACATGCTCGGGACTGTCAGTGACAGTCATTGTCGAGAAAATATTACTGCTGTGAATCCCTCTTCATCCATGCAGCAAATACCCGATGGTGTTGTCAATGTCTTGGATTTAGAAGAGTTGTATAGACCATGTGTAACTGATGGTAATGCTATTACTATCTTAAATCAACCTTCGTTAGAGAAACAAAATCATGATGGACTCTCATCATCAACTATACCTGCTGGAGAAATCACAATTGAAGTACCCGAAACTGCTTTAGAGGCCTCAATAGTTGTATCAGATAGGGAACTGTCTGTGGAAATTCTTTCATCACCCCTGAATCAAACATCTGTTGGAGCTTTCGGTCAAAGCAATACAACTCCCCTTCCAACCACACCCTCTTTACCACAACAAATTCCTGATGCAATATTGCCCTGCATGCCTGATGGACAAATTTCAGCAGAAGTGTCGGAAACTAGCCATGAGGTGGCTGAATGTCAGTTGACAGAAACAGTCAATACAAGTACCACATCAGACCAGCAGGAAGGAGTGGTAACCATGACAGAGAACACTTCGGTCCAGGAGACTGCAATATCTAGACCTGTTGATATCACGGAGCCTCTGGAACAATCGCAGCCAACATCATCTGTACAGTCCCTACCAGACACTGATAGAGCGAGAGAAGTGCAGAACTCTTTGGTGTCTGGTCCAGTTGATATTGTACTAGATAATCAATCCAATAATTCTTCACAGGTTGTTGAGCCTCAAGAGCAGGTGCAGCAATTACCTGCTGTTGAGCTACTTCCTTCCAACCAGGATCTGTCTCACTTGCCTTTGGCAGCGGGAGTCGAACATCAGCAAACTAATGGAGATACTGTCCACAGCCATCATCTTGAGTCATCAAGTGAAGTTTCAAATGAAGCTGTAGGGCGGCAATCCTCTACTTCGGAACTTGTTTCACACTCGCATCAAGATGTGCAAACAGCCTCGAATCTGGGCCTTGTTTCATCTATACCTGGTGGAGTGAGAGCACAATCTTCAGACTCAAGAAACTTATCCACATCCTCAGGGGTCAATAATCTTCACATTCAAACTGCGGGCACATCAGCTTCTGGGATTGTTCCACCTATAAGCCGTGATCCACTTAAAAATGAATTGGACAGAATACGGAGACTTGGAGAGAAAAATATGAAGAATCATGAAGATGCGAGATTGCAGTTGAATTCTGATTATGAGAAGGAATTGGCAGAACTTCGCAGGAAGTATGAAGTTAAATTACTTGACGCCGAGGTTGTGTTTCAGCAACAAAAGATGGAGCTGGATACTTACTATAAAACAGTTCTTCTAAATCAAGCCTTGGCTGAGGCATTTAGGATTAAAAATCATAGCGCATCTGGTAAATCAGGAATGCAGAAAGATGCAAGTTTTACGCAGCAGTTACTTCAGTTTATAACACAGCGATGTGCTTCTCGGCCCCCTCAGGTTGGTTCGCCTTCCCGTGGTCCTATCGGCAGATCTCACCCTGTGGCCCCCCCACCTCTGCGGCTCGCATACAATACAACTGGAGTTTTCTCCAGCGTTCCTGCAAGATCACCTCATCCCCATCCCATGCCTTCATCCTCAGTAAATTTTGAAGCTAGTGGAGAAATCCGTGCTCCCGCACCACATCTGCAGCCTTATCGACCTTCAACACCTGTGCCTGCTTCTGGTACTGGTACAGGTACAGTTCCACCTGGGATGCCAACTCACCCTGCATTGGGTAACATTTCTTTAAATCCTGTGTCACTTCCTTCCCAGCCACCATTGCAGTTGCCGAGGCACCATCAGCCTGATCCTCATAGGGGTCTTTCGCCTGTGACTTCAGGTGGGTTACCCCCTCCTAACTTATCTGCTAACAATCAATCTGATAAGAATGCGCCAAATATTTTGCCTCGTCTGTCACAATTGGCTTCGCTGGACCTAATGGCAAGGTTAGGCAGCGGCAGTAACAGACCACCACCCAATGCATCCGTTCAAGCTACATCTGATGATGTAGTGTGTCTATCGGATGATGATGAATGA 4596 0.4428 MKTVPTTPIARNRRSERLEKKTPPPSSAAPAPARGSSDLKKVEKSASLVPTPLRRSGRLSSSGSPSKGSNSKSFGSCSTEEKRKCVKRLRAQEEEEEEMEEGSEKEERAGSDSKVNKKRLHARVYRASLKSKGDFCGESNKMDKSTQEGDKDSGSKTENDSVVPSGDDKAKEMIAESRFSDPVEDLLLENNVAPCGATTDEARLASESNQSDCRGEETPETAVSRNTKRSQSRLSGPPEGLSEKNASSAAPQSAPQSDHSDCNGNETSPIRNSVFNESLIQKRVSHDRGENLIPSKRKGTMVDMHSDVSATSVDDENCNLAVDADPSKLCGSTGGTNGPCSKRIRRISLSDVQSDQRKLISNVDQLSPGVDGVKLSSRDKEGKSQGNDAEYIRKQQRCLILLLQPEIAKLCELLLLPDNVKKMADSCLQYVLNNRQICTKPVSILQAFQLSLCWTAASLLKHKLDFEASIKLAKQHLNFTCKKEMVDEIYSMLLGLREEILSHICGIIDSSKAPESSNRVYSYSEVAPVVDSANKDTPESTKEIPVCENQEGNIHLMLQEEKQKLKAAMEKEKTEFERRVKLQWAAIRCCSPNDVTRSEKLKLFTSEYEKRVRELNRQHEIRLKDLEAKQLKSLQKPNIVEAISRPGSEVGLSKSPDNSVAFPADTLSKPWYSREQCSGGATSAEDEAQGSEKVSCESRNGEICDQETSDVPNGEAALSMCKFNNLNDDQDEVPPSLNSQSSSEHVPCLPTTSMVSCKEATVADESNVSINVETPNLPSSDEGIASLNLRSPQNCAYSLNELCLQSSEKSAQTCKAVDGNGSNNAVSQNSRLTDERIAAGTTVGVPDGEAHVDMLGTVSDSHCRENITAVNPSSSMQQIPDGVVNVLDLEELYRPCVTDGNAITILNQPSLEKQNHDGLSSSTIPAGEITIEVPETALEASIVVSDRELSVEILSSPLNQTSVGAFGQSNTTPLPTTPSLPQQIPDAILPCMPDGQISAEVSETSHEVAECQLTETVNTSTTSDQQEGVVTMTENTSVQETAISRPVDITEPLEQSQPTSSVQSLPDTDRAREVQNSLVSGPVDIVLDNQSNNSSQVVEPQEQVQQLPAVELLPSNQDLSHLPLAAGVEHQQTNGDTVHSHHLESSSEVSNEAVGRQSSTSELVSHSHQDVQTASNLGLVSSIPGGVRAQSSDSRNLSTSSGVNNLHIQTAGTSASGIVPPISRDPLKNELDRIRRLGEKNMKNHEDARLQLNSDYEKELAELRRKYEVKLLDAEVVFQQQKMELDTYYKTVLLNQALAEAFRIKNHSASGKSGMQKDASFTQQLLQFITQRCASRPPQVGSPSRGPIGRSHPVAPPPLRLAYNTTGVFSSVPARSPHPHPMPSSSVNFEASGEIRAPAPHLQPYRPSTPVPASGTGTGTVPPGMPTHPALGNISLNPVSLPSQPPLQLPRHHQPDPHRGLSPVTSGGLPPPNLSANNQSDKNAPNILPRLSQLASLDLMARLGSGSNRPPPNASVQATSDDVVCLSDDDE 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00328 1531 Coils Coil 86 109 - -
Aip03g00328 1531 PANTHER - 898 1069 - -
Aip03g00328 1531 PANTHER - 1074 1530 - -
Aip03g00328 1531 PANTHER - 243 636 - -
Aip03g00328 1531 Coils Coil 1242 1273 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 54 76 - -
Aip03g00328 1531 Coils Coil 609 629 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 727 747 - -
Aip03g00328 1531 Coils Coil 555 579 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 104 118 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 1016 1070 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 1508 1522 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 77 94 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 676 711 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 1399 1490 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 224 280 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 1 297 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 690 704 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 1468 1490 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 1134 1178 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 136 183 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 202 217 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 1147 1178 - -
Aip03g00328 1531 MobiDBLite consensus disorder prediction 1502 1531 - -
Aip03g00328 1531 Gene3D - 1224 1305 - -
Aip03g00328 1531 PANTHER HELICASE PROTEIN MOM1 243 636 IPR039322 GO:0031507
Aip03g00328 1531 PANTHER HELICASE PROTEIN MOM1 1074 1530 IPR039322 GO:0031507
Aip03g00328 1531 PANTHER HELICASE PROTEIN MOM1 898 1069 IPR039322 GO:0031507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00328 Aip-Chr3 3158228 3167559 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00328 - - aip:107629238 2845.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00328 03 3158228 3167559 Aip03g00328 03 3158228 3167559 ECH
Aip08g00538 08 4457742 4470020 Aip03g00328 03 3158228 3167559 PCT