Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00326 ATGCAAACTCATGATTTTCTTGAACTAAACAACCTCACATCTTCTTCTGATGTATTAGAAGAAGGTAAAGAGGTTCTTGTTCCTATTAACTGCTCATGCATTGGTCAATTTTACCAATTTAATAGTTTCACCTATAGAGTCACTCATAACACCACATTCTTTGATGTTGCATGCCAAGTGTTTGAAGGATTGCTGAGTCCAGTAACACTTTCTGAGGAAAATGTTCCACTTGGGAATAAACCAGATTCTGGTTTTGAAATTAAGATCCCTCTTAGATGTGCATGTGTTGATGATGTCATCAGTAGCATGATGAAGGTTAAGTACCTTGTCACATACCCTGTAGTTTTAGGTGATGATCCGGGAAAATTGACCAAGAAATTTGGTGTCTCAGGTGATGATTTCTATGCAGCTAATGGCTTGAGAGATTGGGCAACCATTTTCCCCAAAACATCTGTTTTGATTCCAATAAGGGACGTTCCAATCAAAATCTTTGATGTTCAAGATTCTCCTTCTTCACCTCCTGGTTTTCTTCCAACAACACCAGTGGTGGAGGCAGGAGAAACGACACAAGGTTCAGATTTATATATTGCAGGGCCTCTTGTAGGATTTGGTTTGCTCATAGCATTACTTGCAAGTGGATTATATGTTAAGAACTTGAAGAAATGGAAAAATGATGCTGTTGTCCCCTCCAGTGATTCAAACTCCACCAACCTGATATGCTCAACAACGGGAAGCTCTCCTATGTATATGGAAACCAGCAGAAGATGCTCCACGGCTTCATGGCTGACGCCGGATCTTCTTGCAGAAATTAAGTACTGCTTGGTTAACTACACCATAGAGGAGATTGAGAAGGCCACCAAGAATTTTAGTGAAGAAAACAAGATTGGTGATTTGGCCTATAAGGGATTACTCAATAATCTTGAGGAGGTGATGGTAAAGAGGATGAGGTTTGAAGACACAGGACAGGTAATTGATTTGCATTCTAAGATCAACCACTTTAACATTGTGGAATTGCTTGGTGTTTGTTATGGTAGTGAGAGCAAAGTTTCATCATCACCATCATGGTCTTATCTGGTTTTTGAATTGCCTAAAAATGGTTGCTTAAGGGAGTGTTTATCTGATCCATGCAATAATCTAAATTGGTACAAAAGGATACAAATTGCTTTTGATATTGCAACATGTCTTTACTATTTACATTGCTGTGCTTTCCCTTCATATGCTCACATGAATGTCAATAGCAGAAACATATTCATAACTTCAAAATGGAGGGGGAAACTAGCAGATGTTGGTAGAGCATTGGCTATAAAATCCACACCCCAAAAGAGAAATAATGATAGTATAGAACTTGTTAAAGGATGGGTGGCACCAGAATACCTCTTGAATAGGACAGTTTCTGAGAAAGTTGACATTTTTGCATTTGGGGTTGTGTTGCTTGAGTTGATCTCAGGAAGGGACAATTTTGATGAGAAAACAGCGAAAGATTCACTTGGATTTTTGTTGGGGGAAGCAAGTGAAGGTGGGTGTTTTGAAGGGTTGAGGAGTTTCATGGATCCTAATCTGAAGGATTATGATCTCCCAGAAGCTTTGTGTTTGTCTTTCTTGGCAAAGGATTGTGTTGCAGATGATCCAATGTATAGACCAACCATGGATGATATCATGAAAGTCCTTTCAAAAATGGTTTAA 1683 0.3892 MQTHDFLELNNLTSSSDVLEEGKEVLVPINCSCIGQFYQFNSFTYRVTHNTTFFDVACQVFEGLLSPVTLSEENVPLGNKPDSGFEIKIPLRCACVDDVISSMMKVKYLVTYPVVLGDDPGKLTKKFGVSGDDFYAANGLRDWATIFPKTSVLIPIRDVPIKIFDVQDSPSSPPGFLPTTPVVEAGETTQGSDLYIAGPLVGFGLLIALLASGLYVKNLKKWKNDAVVPSSDSNSTNLICSTTGSSPMYMETSRRCSTASWLTPDLLAEIKYCLVNYTIEEIEKATKNFSEENKIGDLAYKGLLNNLEEVMVKRMRFEDTGQVIDLHSKINHFNIVELLGVCYGSESKVSSSPSWSYLVFELPKNGCLRECLSDPCNNLNWYKRIQIAFDIATCLYYLHCCAFPSYAHMNVNSRNIFITSKWRGKLADVGRALAIKSTPQKRNNDSIELVKGWVAPEYLLNRTVSEKVDIFAFGVVLLELISGRDNFDEKTAKDSLGFLLGEASEGGCFEGLRSFMDPNLKDYDLPEALCLSFLAKDCVADDPMYRPTMDDIMKVLSKMV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00326 560 Gene3D Transferase(Phosphotransferase) domain 1 364 560 - -
Aip03g00326 560 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 559 - -
Aip03g00326 560 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 2 559 - -
Aip03g00326 560 Gene3D Phosphorylase Kinase; domain 1 254 350 - -
Aip03g00326 560 Pfam Protein tyrosine and serine/threonine kinase 322 497 IPR001245 GO:0004672|GO:0006468
Aip03g00326 560 ProSiteProfiles Protein kinase domain profile. 261 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00326 560 ProSiteProfiles LysM domain profile. 110 154 IPR018392 -
Aip03g00326 560 SUPERFAMILY Protein kinase-like (PK-like) 269 556 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00326 Aip-Chr3 3150250 3151932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00326 11 560 Receptor kinase-like Gene Family AT2G23770 28.829 1.68e-56 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip03g00326 PK_Tyr_Ser-Thr 3.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00326 - - gmx:100818937 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00326 03 3150250 3151932 Aip03g00326 03 3150250 3151932 ECH