Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00319 ATGAACAAGATAGAGGGATACGTAGAGATATTAGGGAAGGTTAACTTTGTTACAATTGTTGTTGTATTGACCTGCATTGTGGGGCCAGCGTCTTCTCAAACAGCCCCCGGCGGTGGCGCCGCGGCCGGCGGCGGCACCGGCCTCCCCAATGAAGCTGCAGTTCAGTTATTTGCACAGGAAATGTACAAAAGCATGGGTAGTTACACCAACGTCTTCAAGGATTCAATCAGGAAACACTTGGGATTTTGCATTGTGGATGCGGACCGAGATTGGGATGGTGCCTTCAATTTCTCCAGTGATCTCTCTTTTCTCACCAACTGTGCCAAAAATTTACAAGGAGATATTACACAGCGCATGTGCATAGGTTCAGAGCTTGAAATGTATTCATCGCTGGTTAAAAGCAACAAAAGGTTTGTGAATCCGAATGTGAACTGCAATACGAGCACGTGGCTAAATGGGTGTGAGCCTGGATGGGCATGTAAGGCTAATGAGAAAGTAGAGCTTAACAGCACCCAGAAAGACATACCTGTTAGAAATTCAGATTGCCAACCTTGTTGTGAAGGTTTCTTTTGCCCTCCTGGTCTTACTTGCATGATACCTTGTCCATTGGGAGCTTATTGTCCACGTGGAACTCTCAATGCAACAAGTGGAGTATGTCAACCATATCGTTATCAGATACCTCCTGGAAAGTTAACCCATTCTTGTGGGGGAGCAGATATTTGGGCTGATATTAGAAGCAGTGCAGAGGTTTTCTGTGCTCCAGGAGCATTCTGTCCATCTAATATCATAAAAAATGATTGCAATAAGGGGTATTACTGCAGAACAGGTTCTACTGCTCAAGAGAGATGTTTCACTTTGGCAACATGTGAACCTAAATCAGAAAACCAGAATATTACTGCATATGGTGTCCTGGTCTTTGCTGGAGTGTGTTTCATGCTCATTATCATATATAACTGTTCTGATCAAGTTCTTGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCTGCAGCACACGTGAGAGAAACACAAGCGCGAGAAAAATGGAAATCAGCAAAAGACATAGCCAAGAAGCACGCAGTAGGTCTGCAATCGAGTTTGTCGCGAACATTTTCACGCCAAAAGACTAACAAGGGATCCGGAACCTTACCACCTTCTGCCCCTGCAAAAGCAAAGAAAAAGGACAAGAGCAACCTCAGCAAGATAATAAGTGACATTGAGGAAGATCCTGATAGCCAAGAAGGTTTTAATATTCAGATAGGGGATAAGAATGTTAAGAAGCAAGCACCAAAGGGTAAGCAATTGCATACTCAGAGTCAAGTGTTCAAGTATGCATATAATCAGATTGAGAAAGAGAAGGCCTTACAGGAACAAATGAAGAACATGACCTTCTCTGGAGTTATCTCAATGGCTAATGAGATTGAGATAAGGAAAAGGCCTACCATTGAGGTTGCATTTAAAGATTTAACACTCACTTTGAAAGGAAAAAACAAACACCTATTAAGAAGTGTGACAGGTAAATTGTTTCCCGGCCGGGTTTCAGCAGTTATGGGACCATCTGGGGCCGGCAAGACAACATTTCTTTCTGCTTTGACCGGGAAAGCGGCTGGATGCACCACAACTGGTCAAGTTCTTGTAAATGGCCAGGAATCGCCAATTCGGTCGTACAAGAAAATCATTGGATTTGTGCCACAAGATGATATTGTTCATGGAAATTTGACAGTGGAGGAAAATCTGTGGTTCAGTGCCAGATGCAGGCTCGCGGCTGATCTACCAAAAGAGGAGAAAGTCTTAGTGGTTGAAAGAGTCATCGAGGCTCTGGGTTTGCAGGCAATTAGGGACTCTATGGTTGGTACGGTGGAGAAGAGAGGAATCTCCGGAGGACAGAGGAAAAGAGTAAATGTTGGACTCGAAATGGTGATGGAACCTTCACTTCTAATTTTAGATGAACCCACTTCTGGTTTGGACAGTTCATCATCTCAGTTACTTCTTAGAGCTCTTAGACGTGAAGCCCTTGAAGGAGTTAACATATGTATGGTCCTTCACCAACCTAGTTACACATTGTTCAGGATGTTTGATGACTTTATATTGCTAGCTAAAGGAGGACTTACAGTGTATCATGGACCAGTGAACAAGGTGGAAGAGTACTTTTCCGGCTTGGGAATTGTTGTCCCTGACCGCGTCAACCCTCCGGATTACTACATTGACATTTTAGAAGGAATCATAAAGATACCAGCAGGGTCAGGAGTGAGCCAGAAACAACTACCTGTTAGATGGATGCTTCATAATGGCTACCCTGTGCCGATGGATATGCTTGAACTCATTGAAGGAATGTCTACTAACAATACTGGTTCACCAAGTGTAGCAGCTTCCACTCCAGATAACAATGCTGGTCCATCTTTTGCTGGAGAACTTTGGCAGGATGTGAAGGCCAGTGTTGAGATGAAGAGGGACAATTTCAGTTATAAATTCTTGACTTCACACGATTTGTCCAATAGGAAGACACCTGGATCATTCACCCAATACAAGTACTTTCTTGGGAGAGTTGGTAAGCAGCGGCTACGAGAAGCTAGATCACTTGCCGTGGACTTTATGATCTTGCTTCTAGCAGGACTTTGCCTAGGAACACTAGCCAAAATGAGTGATGAATCATTTGGAGCAACTGGTTATACATACACAGTAATAGCAGTATCACTCCTTTCGAAGATCGCGGCTTTGAGATCCTTCTCCTTGGATAAGTTGCACTATTGGAGGGAGAGTGCTTCTGGCATGAGCAGCCTTGCATATTTTCTTTCAAAGGACACAGTTGATCATTTCAGTACACTCATCAAACCTCTGATGTATCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCTTCTTTTCAAGCCAACTATGCTGTTCTGCTATGTTTGGTGTACTGTGTTACTGGCATAGCTTATGTGTTAGCAATCTTCCTTGAACCTGGTCCAGCCCAGCTGTGGTCTGCATTGCTTCCAGTAGTTTTGACACTCATCGCAACCTATGAAAATTCTGAGAATAATGGATTCATCCGCTTTGTGGCAGACATATGCTACGCAAGGTGGGCTCTTGAAGCATTTGTTATATCAAATGCCAAAAGATATGCTGGAGTTTGGTTAATAAGTCGATGTGGTGCACTCTATAAGAGTGGCTATGATCTCAACCGTTGGTATCAATGTTTAGGCCTTCTTGTAGCAACTGGAGTAATTAGTCGTGTGCTGGCATTCTTTTGTATGATAACATTCCAGAAGAAGTAG 3285 0.4335 MNKIEGYVEILGKVNFVTIVVVLTCIVGPASSQTAPGGGAAAGGGTGLPNEAAVQLFAQEMYKSMGSYTNVFKDSIRKHLGFCIVDADRDWDGAFNFSSDLSFLTNCAKNLQGDITQRMCIGSELEMYSSLVKSNKRFVNPNVNCNTSTWLNGCEPGWACKANEKVELNSTQKDIPVRNSDCQPCCEGFFCPPGLTCMIPCPLGAYCPRGTLNATSGVCQPYRYQIPPGKLTHSCGGADIWADIRSSAEVFCAPGAFCPSNIIKNDCNKGYYCRTGSTAQERCFTLATCEPKSENQNITAYGVLVFAGVCFMLIIIYNCSDQVLATRERRQAKSRERAAAHVRETQAREKWKSAKDIAKKHAVGLQSSLSRTFSRQKTNKGSGTLPPSAPAKAKKKDKSNLSKIISDIEEDPDSQEGFNIQIGDKNVKKQAPKGKQLHTQSQVFKYAYNQIEKEKALQEQMKNMTFSGVISMANEIEIRKRPTIEVAFKDLTLTLKGKNKHLLRSVTGKLFPGRVSAVMGPSGAGKTTFLSALTGKAAGCTTTGQVLVNGQESPIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLAADLPKEEKVLVVERVIEALGLQAIRDSMVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLTVYHGPVNKVEEYFSGLGIVVPDRVNPPDYYIDILEGIIKIPAGSGVSQKQLPVRWMLHNGYPVPMDMLELIEGMSTNNTGSPSVAASTPDNNAGPSFAGELWQDVKASVEMKRDNFSYKFLTSHDLSNRKTPGSFTQYKYFLGRVGKQRLREARSLAVDFMILLLAGLCLGTLAKMSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTLIKPLMYLSMFYFFNNPRSSFQANYAVLLCLVYCVTGIAYVLAIFLEPGPAQLWSALLPVVLTLIATYENSENNGFIRFVADICYARWALEAFVISNAKRYAGVWLISRCGALYKSGYDLNRWYQCLGLLVATGVISRVLAFFCMITFQKK 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00319 1094 Pfam ABC-2 type transporter 684 1094 IPR043926 GO:0140359
Aip03g00319 1094 CDD ABCG_EPDR 484 710 - -
Aip03g00319 1094 MobiDBLite consensus disorder prediction 365 385 - -
Aip03g00319 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 720 IPR027417 -
Aip03g00319 1094 MobiDBLite consensus disorder prediction 362 400 - -
Aip03g00319 1094 MobiDBLite consensus disorder prediction 335 354 - -
Aip03g00319 1094 SMART AAA_5 512 713 IPR003593 -
Aip03g00319 1094 Pfam ABC transporter 503 655 IPR003439 GO:0005524
Aip03g00319 1094 ProSitePatterns ABC transporters family signature. 627 641 IPR017871 GO:0005524
Aip03g00319 1094 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 50 1090 - -
Aip03g00319 1094 Gene3D - 474 721 IPR027417 -
Aip03g00319 1094 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 486 727 IPR003439 GO:0005524
Aip03g00319 1094 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 50 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00319 Aip-Chr3 3048231 3054601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00319 513 706 Calmodulin-binding Proteins AT2G36910 29.703 9.00e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00319 - - gmx:100794093 1704.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00319 03 3048231 3054601 Aip03g00319 03 3048231 3054601 ECH