Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00318 ATGAAGTTTTCTTCTAATAATACCCCACCCCCTCGTAAGGTTAGCATCAATAATAATAATAACAATAAAGATCGTCACAAAAAGGTTAATGGAAGAGAAAGTCGCATTCTGTTGCCACCGTTATGTGCTGCGCGCGTGTTCCAGCTCACGCGCGAGCTAGGGCACAAGACTCATGGTGACACAATTGAGTGGCTCTTGCGCCACGCCGAACCTTCCATAGCCGCTGCAACTAGCGGCAAAAGTATAGTGCCACCACCATCATCATCATCGAACACCAATGATAATAATGGTAATCAAGGTATGAAAAATGGTGGTGGTGACACTGGGTGGTTGGAGTATGATGTTCTTGCAAACCTTGGTGTAGGGTTTTCTGCCAATGAAATTGCAGTGATCCAAGCAATGATCAAGAGCTTCAGCTGA 420 0.4524 MKFSSNNTPPPRKVSINNNNNNKDRHKKVNGRESRILLPPLCAARVFQLTRELGHKTHGDTIEWLLRHAEPSIAAATSGKSIVPPPSSSSNTNDNNGNQGMKNGGGDTGWLEYDVLANLGVGFSANEIAVIQAMIKSFS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00318 139 ProSiteProfiles TCP domain profile. 22 76 IPR017887 -
Aip03g00318 139 MobiDBLite consensus disorder prediction 19 33 - -
Aip03g00318 139 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 12 99 - -
Aip03g00318 139 MobiDBLite consensus disorder prediction 76 105 - -
Aip03g00318 139 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 99 IPR005333 GO:0003700
Aip03g00318 139 MobiDBLite consensus disorder prediction 1 33 - -
Aip03g00318 139 Pfam TCP family transcription factor 21 97 IPR017887 -
Aip03g00318 139 MobiDBLite consensus disorder prediction 1 18 - -
Aip03g00318 139 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00318 Aip-Chr3 3045361 3045780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00318 11 100 TCP Transcription Factor Family AT3G27010 54.167 2.15e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip03g00318 TCP 2.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00318 - - ahf:112736155 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00547 08 4592750 4593316 Aip03g00318 03 3045361 3045780 PCT