Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00315 ATGCCTGAAATTGAAGGATCTCCGGGAAGCTCCATGCATGGAGTCACCGGAAGAGAACAAACCTTCATATCCTCCGTCTCATCCCCAATGGTTCCCACCGACACCACGGCCAACTTCGCCTTGCCCGTGGATTCAGAGCACAAGGCCAAAGTCTTCAAGATCTTCTCCTTAGCCAATCCTCACATGAGAACCTTCCACTTGTCATGGATATCATTCTTTACTTGCTTCGTCTCTACCTTCGCCGCCGCCCCTCTCATCCCCATAATCCGGGACAACCTAAACCTAACCAAGGTAGACATTGGCAACGCCGGTGTTGCCTCCGTCTCCGGAAGCATATTCTCCAGGCTCACAATGGGTGCAGTTTGCGACCTCTTAGGGCCGCGATACGGCTGCGCATTCCTTATCATGTTAACCGCGCCGACTGTATTCTGCATGTCGTTTGTTAACGACGCTGCAGGATACATAGCGGTGCGGTTCATGATAGGGTTTTCGCTTGCAACATTCGTGTCGTGCCAGTATTGGATGAGTACAATGTTTAATAGTAAGATCATAGGGTTTGTGAATGGAACTGCGGCGGGGTGGGGGAACATGGGTGGCGGAGCCACCCAGTTGATAATGCCGTTGGTTTATGAGGTGATTAGGAAAGCTGGGTCAACTCCATTCACTGCATGGAGGATTGCTTTCTTTGTACCCGGTTTCTTGCATGTTATAATGGGGATCATGGTGTTAACCCTAGGACAAGATTTGCCTGATGGTAACCTTGGTAGCTTGCAAAAGAAGGGGGATGTTTCCAAAGACAAATTCTCAAAGGTGTTGTGGTATGCCATCACAAATTACAGGACATGGGTCTTTGCCCTTTTGTATGGTTACTCCATGGGAGTTGAACTTACCACTGACAACGTAATTGCCGAATATTTCTATGACAGGTTTAATCTGAAGCTACACACAGCTGGAATGATAGCAGCAACATTTGGAATGGCAAACATCATAGCACGGCCATTTGGTGGATACACATCTGATGTTGCAGCCCGGTTGTTCGGAATGAGGGGCAGGCTTTGGGCCCTATGGATCCTCCAAAGCCTTGGCGGTGTGTTCTGCATATGGCTGGGGCGGGCCAACTCTCTGCCAATAGCCATCGTGGCGATGATTCTCTTCTCCGTGGGAGCACAAGCCGCATGCGGCGCAACCTTCGGCATCGTCCCCTTCATCTCAAGAAGATCCCTTGGAATCATCTCAGGGCTCACCGGTGCAGGTGGCAACTTCGGTTCAGGGTTGACTCAGCTGGTTTTCTTCTCAACGAACCGGTTCTCGACGTCGGCGGGGCTGTCGTTGATGGGTGGCATGATTGTGGCATGCACTTTGCCGGTGACACTGGTTCATTTTCCTCAATGGGGTAGCATGTTTTTCCCTGCTTCAAAAGATGCACAGAAATGCACTGAAGAATACTATTACACTTCTGAATGGAATGAAGAAGAGAAGCAGAAGGGTTTGCACCAAGGAAGTCTTAAGTTTGCTGAGAATAGCAGATCTGAGAGAGGAAAGCGTGTTGCATCTGCACCAACTCCACCCAACACAACCCCTACCCATGATAATAATAATGTCTAA 1605 0.4947 MPEIEGSPGSSMHGVTGREQTFISSVSSPMVPTDTTANFALPVDSEHKAKVFKIFSLANPHMRTFHLSWISFFTCFVSTFAAAPLIPIIRDNLNLTKVDIGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVNDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGFVNGTAAGWGNMGGGATQLIMPLVYEVIRKAGSTPFTAWRIAFFVPGFLHVIMGIMVLTLGQDLPDGNLGSLQKKGDVSKDKFSKVLWYAITNYRTWVFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGMIAATFGMANIIARPFGGYTSDVAARLFGMRGRLWALWILQSLGGVFCIWLGRANSLPIAIVAMILFSVGAQAACGATFGIVPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTNRFSTSAGLSLMGGMIVACTLPVTLVHFPQWGSMFFPASKDAQKCTEEYYYTSEWNEEEKQKGLHQGSLKFAENSRSERGKRVASAPTPPNTTPTHDNNNV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00315 534 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Aip03g00315 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Aip03g00315 534 SUPERFAMILY MFS general substrate transporter 59 459 IPR036259 -
Aip03g00315 534 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Aip03g00315 534 MobiDBLite consensus disorder prediction 492 534 - -
Aip03g00315 534 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 526 - -
Aip03g00315 534 MobiDBLite consensus disorder prediction 492 513 - -
Aip03g00315 534 Gene3D MFS general substrate transporter like domains 264 467 IPR036259 -
Aip03g00315 534 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 526 IPR044772 GO:0015112
Aip03g00315 534 MobiDBLite consensus disorder prediction 519 534 - -
Aip03g00315 534 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00315 Aip-Chr3 2987101 2989236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00315 6 529 Inorganic Solute Cotransporters AT5G60770 79.389 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00315 K02575 - gmx:100807710 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00315 03 2987101 2989236 Aip03g00315 03 2987101 2989236 ECH