Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00312 ATGGAAGAAATACAGTCTCAATCGGATGCATATCGGTCTTCTTCTTCATCAGCAAGTAGCCCGGCGAGTAGGGTGCCATCAAGTCACTTCTTCTACCTTAGAAAGCCGGGTTCTCTTCGACAACCAATCTCATTTGAGGACTCACCTGAATGGGAAGACACTGATGTTGAAGCTAGAGGTGATGAAGGAGGAGGAGACACTATCAATGTTGCAACCCCGGCTTCACCTTCGCTTTCTAAGCTCAACAGTGGTTCCTTGGCATCTCCATATGGTTCATATATATTGGAGGGTGCAGTTCTTCCTCATAAGATCGTTGGTGCTTCTGTTGTGTGGAGGGATTTGACTGTTACCATAAAGGGAAAAAGGAAGTACTCTGATAATGTTATTAAGAGTTCAACTGGTTATGCCTTACCTGGTACAATGACTGTGATTATGGGACCTGCTAAATCAGGGAAATCGACGTTGTTACGCGCCATTGCAGGAAGATTGCATCCTTCAACCAGGACTTATGGTGAAGTGTTTGTGAATGGGGCGAAATCGCACTTGTCCTATGGATCATATGGTTTTGTGGAGAGAAAGACCAATCTGATTGGATCACTCACTGTGAGAGAGTTTCTGTACTATTCAGCTCTGCTTCAACTCCCAGGATTCTTATTTCAGAAAAAGAATGTGGTAGAGGAAGCTATCCAAGCGATGTCTTTAGGTGACTATGCAAATACACTTATTGGTGGACATTGTTATTCAAAGGGCCTCTCCGGGGGCGAGAGAAGACGTGTTAGCATTGCGAGGGAGCTTGTGATGAGACCACAAATCCTGTTTATAGATGAACCTCTTTATTGTCTGGACAGTGTCTCAGCACTTTTGATGATGGTTACATTGAAGAAACTTGCAAGCAGTGGCTGCACTCTTATTTTTACTATTTACCAGAGCAGCACAGAAGTCTTCGGCCTTTTTGATCGAATATGCCTTCTTTCGAATGGAAATACTTTGTTCTTTGGAGAAACATTAGCTTGCTTGCAGCACTTCTCAAATGCTGGATTTCCCTGCCCTATCATGCAAAGTCCTTCCGATCACTTTCTTCGAGCAATCAATACAGATTTTGACAGGATAATTGCAATGTGTAAAAACTGGCAGGATGATAATGGAGACTTTTCTTCGGTCAACATGGACACAGCAGTGGCTATTTGCACACTTGAAGCAACATATAAATCATCTGCAGATGCAGCTGCTGTTGAAAATATGGTTATGAAACTCACAGAGAAGGAAGGTCCATCTCTTAAATACAAAGGCAAAGCTAGTGCTGCTACTCGCATAGCAGTCTTGACATGGAGGTCTTTATTGGTTATGTCAAGGGAGTGGAAATATTACTGGATTCGTCTGGTTCTCTGTATGCTTCTTACACTTTGCATTGGTACTATATTTTCCGGCTTGGGGCACTCGCTTTCTTCAGTTGGGACTAGAGTTACAGCAATTTTTGTATTTGTATCATTCTATTCGCTTCTAAGCATTGCTGGCGTGCCTGGACTTATTAAAGAAATCAAGATGTATGAATGTGAAGAATCTAACCAGCATTCAAGTGCACTAGTATTTTTACTTGGACAATTCTTGTCCAGCATGCCATTCCTTTTCCTCATCTCCATTTCATCAAGTCTAGTTTTCTACTTCCTAGTAGGGCTGAGAGATGAATTCAACTTCTTAATGTACTTTGTGCTCAACATTTTCATGTCTCTTTTAGCAAGTGAAGCACTTATGCTACTTGTTGCTACTTTATGGCAAGATATCTTCTGGAGTTTCTTAACAACTTTGTGCATTCAGGTAGTGATGATGCTTTCCGCCGGATATCTTAGAATCCGAAATGATTTGCCTGGACCAGTGTGGATATATCCAATGTCATATATATCCTTTCATACATACTCTATTCAGGGTCTATTGGAGAATGAGTACCTAGGAAGTACCTTTTCAATTGGGGAGGTGAGGACCATATCAGGATTTCAAGCTCTCCAAAACATCTATGACATCTCTTCTGACACCAATTCAAAGTGGTCAAATTTGCTGCTGGATATGTCTCGTAAAATTCTTGGTCATTACTTAAATGTATCTCATTCTCAATCCACAATTGCACCAGAACTTAAGATTCTTGTGGTTTTCTCTGGTGAATTACATTGA 2166 0.4127 MEEIQSQSDAYRSSSSSASSPASRVPSSHFFYLRKPGSLRQPISFEDSPEWEDTDVEARGDEGGGDTINVATPASPSLSKLNSGSLASPYGSYILEGAVLPHKIVGASVVWRDLTVTIKGKRKYSDNVIKSSTGYALPGTMTVIMGPAKSGKSTLLRAIAGRLHPSTRTYGEVFVNGAKSHLSYGSYGFVERKTNLIGSLTVREFLYYSALLQLPGFLFQKKNVVEEAIQAMSLGDYANTLIGGHCYSKGLSGGERRRVSIARELVMRPQILFIDEPLYCLDSVSALLMMVTLKKLASSGCTLIFTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSSVNMDTAVAICTLEATYKSSADAAAVENMVMKLTEKEGPSLKYKGKASAATRIAVLTWRSLLVMSREWKYYWIRLVLCMLLTLCIGTIFSGLGHSLSSVGTRVTAIFVFVSFYSLLSIAGVPGLIKEIKMYECEESNQHSSALVFLLGQFLSSMPFLFLISISSSLVFYFLVGLRDEFNFLMYFVLNIFMSLLASEALMLLVATLWQDIFWSFLTTLCIQVVMMLSAGYLRIRNDLPGPVWIYPMSYISFHTYSIQGLLENEYLGSTFSIGEVRTISGFQALQNIYDISSDTNSKWSNLLLDMSRKILGHYLNVSHSQSTIAPELKILVVFSGELH 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00312 721 Gene3D - 105 346 IPR027417 -
Aip03g00312 721 MobiDBLite consensus disorder prediction 1 26 - -
Aip03g00312 721 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 109 351 IPR003439 GO:0005524
Aip03g00312 721 SMART AAA_5 138 328 IPR003593 -
Aip03g00312 721 Pfam ABC-2 type transporter 438 648 IPR013525 GO:0016020|GO:0140359
Aip03g00312 721 ProSitePatterns ABC transporters family signature. 251 265 IPR017871 GO:0005524
Aip03g00312 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 345 IPR027417 -
Aip03g00312 721 PANTHER ABC TRANSPORTER G FAMILY MEMBER 3 16 686 - -
Aip03g00312 721 Pfam ABC transporter 138 278 IPR003439 GO:0005524
Aip03g00312 721 MobiDBLite consensus disorder prediction 40 76 - -
Aip03g00312 721 CDD ABCG_EPDR 106 333 - -
Aip03g00312 721 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 16 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00312 Aip-Chr3 2966794 2970394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00312 136 312 Calmodulin-binding Proteins AT2G36910 25.668 4.81e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00312 - - jcu:105628040 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00312 03 2966794 2970394 Aip03g00312 03 2966794 2970394 ECH