Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00289 ATGATGGTGGCAAAGGATAATAATCACCAAGGGTATCATGGTAATTTCGCAAAGCAATTTCACAAGGGTAAATGGTTCATGGTGTTTGGTTCATCATTGATATTATCATGTGCTGGTGGCTCTTACATGTTTGGTATGTATTCAAAGGATCTTAAGGCAACATTAGGATATGACCAAACTACCCTCAACACAATAGGTTTCTTCAAGAACCTAGGTGCAAACAGTGGCATAATCTCAGGGCTAATTGCTGAAATTACACCAACATGGATGATTCTTCTCATTGGAGCTGTCACAAACTTTGTTGGTTACTTCATGGTTTGGCTCTCAATAACACAGAAGATTCCAAAGCCTGAGGTTTGGCAAATGTGTCTCTACTTTGTGATTGGAACACATTCTCAGAATTTTGCAGCAACATCAGTGATGATCTCATGTGTCAACACATTCCCTCTCAACAGAGGAATTGTTGTTGGATTCTTGCAGAGTTTTGTTGGTTTGAGTGCAGCTATAATCTCACAATTCCATAAGACTATTATTGCTTCTTGTTCAGTTCATTATTATTATCAAGATACAAGGTCTATTGTTCTTGTTCTTGCTGTTTTTCCAGCTATTGTGTCAATTCTCTTTGCATTCACAATTAGAGGCTTTGAGCCTTCAACACAATTCAATGACACTAGACCCTTTTTTCATTTCTTTTACATAGCCACTGCTCTTGCAACTTTCATCTTGGGTATCACCATTACTCACTTGTTTGAATGTCATCTTTCAAAGTTTGCATATCATTTGATTGCATTTCTAATCTTTCTGTTCTTGCTTGTCCTGCCTCTCTTTGTTGCCATAAGAGAGGATCTGTTCTTATGGAAACTTTCTGAGGCTGAGAGTGAGAATCTCAATGTCATCATTGAGAATCAAGAGAATGATAATAATAATAACAATAAGGCAGAGCCAACAACATCAACATCAACATCAACAACAATGTATTCTTGTTTTAAAAGCATATTGAATAAGCCTGAAAGAGGAGAAGATCACACAATATTACAAGCACTTTTAAGTGTTGACATGTTTCTGATATTCTTTGTTTCAATATGTGGGCTTGGTGCTAATTTGGCAGCAATTGACAACCTTGGACAGATTGGTGAATCTTTAGGGTACTCAAAGGTTAAAACTCAGTATTTTGTATCTCTAGTAAGTGTATGGAACTTCTTTGGGAGAGTTTTTTCTGGTTTTGCATCTGAGGCATTGTTAGGACTATACAAGTTACCTAGGCCATGGTTGGTAACAATTTCTCTATTCATCTCAGTGATTGGTCATGTTGCAATTGTGCTTAGCAATGACAGTGGACTATACATAGCAAGCTGCATAATTGGATTCTGCTTTGGTGCTCAAATTCCATTGATTTCTGCCACAATTTCTGAGATTTTTGGCCTAAAACACTATGGTGCATTGCTGAATTATTGGCACCTAGGGAGCCCTATAGGTTCTTATTTGATGAATGTGTTGGTTGGTGGGACCTTATATGATGCAGAGGCTAAGAACCAGCTTAGGAAAATTGATCATAGTGTTAGTTTGAATGAGGAGGTGGGAGAATTAGTATGCTTTGGAATGGATTGTTATAATTTCACTTTTGTCATTTTTGCCACTATCATACTCTTAGattccttcaccgtctgttggtccctgggcagGTGGTGTTTTGTGGTTCCAGAATTTAATAGAGCTCTCTCAAGTTAA 1728 0.3657 MMVAKDNNHQGYHGNFAKQFHKGKWFMVFGSSLILSCAGGSYMFGMYSKDLKATLGYDQTTLNTIGFFKNLGANSGIISGLIAEITPTWMILLIGAVTNFVGYFMVWLSITQKIPKPEVWQMCLYFVIGTHSQNFAATSVMISCVNTFPLNRGIVVGFLQSFVGLSAAIISQFHKTIIASCSVHYYYQDTRSIVLVLAVFPAIVSILFAFTIRGFEPSTQFNDTRPFFHFFYIATALATFILGITITHLFECHLSKFAYHLIAFLIFLFLLVLPLFVAIREDLFLWKLSEAESENLNVIIENQENDNNNNNKAEPTTSTSTSTTMYSCFKSILNKPERGEDHTILQALLSVDMFLIFFVSICGLGANLAAIDNLGQIGESLGYSKVKTQYFVSLVSVWNFFGRVFSGFASEALLGLYKLPRPWLVTISLFISVIGHVAIVLSNDSGLYIASCIIGFCFGAQIPLISATISEIFGLKHYGALLNYWHLGSPIGSYLMNVLVGGTLYDAEAKNQLRKIDHSVSLNEEVGELVCFGMDCYNFTFVIFATIILLDSFTVCWSLGRWCFVVPEFNRALSS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00289 575 SUPERFAMILY MFS general substrate transporter 21 214 IPR036259 -
Aip03g00289 575 Pfam Nodulin-like 24 279 IPR010658 -
Aip03g00289 575 Gene3D MFS general substrate transporter like domains 348 568 IPR036259 -
Aip03g00289 575 Pfam Major Facilitator Superfamily 354 551 IPR011701 GO:0022857|GO:0055085
Aip03g00289 575 SUPERFAMILY MFS general substrate transporter 229 555 IPR036259 -
Aip03g00289 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 552 - -
Aip03g00289 575 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 10 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00289 Aip-Chr3 2813573 2819024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00289 15 547 Nodulin-like Gene Family AT2G28120 48.321 1.18e-177 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00289 - - aip:107632379 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00289 03 2813573 2819024 Aip03g00289 03 2813573 2819024 ECH