Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g00281 | ATGGATTACAAGGAAGACTATTATTTGTCCAACACTAGCAATGATAATTGTAATGTTGTTCATCATGATGCTACCCATCATATAGCCAAGGGAAAACGGACCAAAAGGTTGAGGCTTTTGTGTGGCGGCGCAACCGTCATCATGCCGGCCTCTAGCTGTTCTAGCGCTTCCGGCGATGATCACGGCTCGTTTTCGATTTCTTCCACAACCAATCAAGAGGAAGAAGACATGGCTAATTGCTTGATTCTTCTTGCTCAAGGAGGAGGAGATTCTCATCAAAAACCGCCACAAGTTGATGATCAAGATGAAGATGATGATGGTTGTGGTAACAACAAGAAGAAATTCTCGGAGATTGAAACCGCCACCATAAACAACAACAAGGTTGGTTTCTATATTTATGAGTGCAAGACTTGTAACCGAACCTTCCCTTCCTTTCAAGCCTTGGGTGGTCATAGAGCCAGTCACAAGAAGCCTAAGCTCACAACAATCCCTGCCGCCGAGGACAAGAAACCACCACCACCGTCTCCGCCACCTCCACTGCCTCCCCCACCACCGCAGCAACTTATGATGAAGACCAATTATGACCATCATCTTCATCATAGCCAGCAGATTGAAACTGTCCCTCCAAATAATAATAATCCAATAATTTCTCTACAATTTGGGAGTGGGCAAAAAGGTAATTTCCACGGGAACAACAACAACAAGCCCAACAAGATTCACGAGTGCTCCATATGTGGCTCCGAATTCACATCCGGCCAAGCACTGGGTGGACACATGAGAAGGCATAGGGCTACAGCGGCCGCAGCCGCCAATAGTACTGCTCAGGCCAATGTTGGCCTAAGCAGAATTGAGGCAACTTCTACTGTTATAACTACAACAGTAGAAGTTCAGCCTCGAAATATTCTAGAATTGGATCTCAACCTTCCGGCTCCGGAGGAAGACCTCCGGGAGCCAAAGTTTCAGTTTGCTACCGCAGCAACTAAGAAATCTATGGTGCTCTCAGCTGCTCCGGCTTTGGTGGACTGCCATTATTAG | 1035 | 0.4667 | MDYKEDYYLSNTSNDNCNVVHHDATHHIAKGKRTKRLRLLCGGATVIMPASSCSSASGDDHGSFSISSTTNQEEEDMANCLILLAQGGGDSHQKPPQVDDQDEDDDGCGNNKKKFSEIETATINNNKVGFYIYECKTCNRTFPSFQALGGHRASHKKPKLTTIPAAEDKKPPPPSPPPPLPPPPPQQLMMKTNYDHHLHHSQQIETVPPNNNNPIISLQFGSGQKGNFHGNNNNKPNKIHECSICGSEFTSGQALGGHMRRHRATAAAAANSTAQANVGLSRIEATSTVITTTVEVQPRNILELDLNLPAPEEDLREPKFQFATAATKKSMVLSAAPALVDCHY | 344 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g00281 | 344 | MobiDBLite | consensus disorder prediction | 149 | 190 | - | - | |
Aip03g00281 | 344 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 135 | 155 | IPR013087 | - | |
Aip03g00281 | 344 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 240 | 267 | IPR013087 | - | |
Aip03g00281 | 344 | SMART | c2h2final6 | 240 | 262 | IPR013087 | - | |
Aip03g00281 | 344 | SMART | c2h2final6 | 133 | 155 | IPR013087 | - | |
Aip03g00281 | 344 | Pfam | C2H2-type zinc finger | 240 | 264 | - | - | |
Aip03g00281 | 344 | Pfam | C2H2-type zinc finger | 133 | 158 | - | - | |
Aip03g00281 | 344 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 21 | 344 | - | - | |
Aip03g00281 | 344 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 133 | 160 | IPR013087 | - | |
Aip03g00281 | 344 | PANTHER | ZINC FINGER PROTEIN, PUTATIVE-RELATED | 21 | 344 | - | - | |
Aip03g00281 | 344 | MobiDBLite | consensus disorder prediction | 167 | 188 | - | - | |
Aip03g00281 | 344 | SUPERFAMILY | beta-beta-alpha zinc fingers | 132 | 262 | IPR036236 | - | |
Aip03g00281 | 344 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 242 | 262 | IPR013087 | - | |
Aip03g00281 | 344 | Gene3D | Classic Zinc Finger | 223 | 295 | - | - | |
Aip03g00281 | 344 | MobiDBLite | consensus disorder prediction | 86 | 112 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g00281 | Aip-Chr3 | 2737167 | 2738541 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g00281 | 27 | 344 | C2H2 Transcription Factor Family | AT2G28200 | 39.577 | 2.13e-56 | 183 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aip03g00281 | zf-C2H2_6 | 2.8e-11 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g00281 | - | - | aip:107629278 | 622.468 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip03g00281 | 03 | 2737167 | 2738541 | Aip03g00281 | 03 | 2737167 | 2738541 | ECH | |
Aip03g00281 | 03 | 2737167 | 2738541 | Aip09g02755 | 09 | 126803185 | 126804896 | ECH | |
Aip08g00577 | 08 | 5029550 | 5030663 | Aip03g00281 | 03 | 2737167 | 2738541 | ECH | |
Aip06g01832 | 06 | 51970736 | 51971904 | Aip03g00281 | 03 | 2737167 | 2738541 | ECH | |
Aip02g03305 | 02 | 109778426 | 109779307 | Aip03g00281 | 03 | 2737167 | 2738541 | ECH | |
Aip08g00577 | 08 | 5029550 | 5030663 | Aip03g00281 | 03 | 2737167 | 2738541 | PCT |