Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00269 ATGAAGGTGGAACCTCCATGGCTGGAAGGACTATTGAGAAGCACATTCTTCAGAATATGCAAAGAACACATGAAGTCACCAAGAAACGAATGCAACATGTTCTGTCTCGATTGTGGGGACCATGCATTCTGCTTCTACTGCAAATCTTCTTTCCATAACCATCATCAAGTCATTCAAATAAGGAGGTCTTCATATCATGATGTAGTGAGAGTAACGGAAATTCAGAATGTTTTGGACATAAGTGGTGTTCAGACATATGTTATAAACAGTGCTAGAGTTCTATTTCTCAATGAGAGGCCACAGAATCAACTTAAGGCCAATCATAATAATAATAGTGCTTCTAATAATAATGGTAAAAGCAATTCACATTTTTGTGAAATATGTAGAAGAAATCTCCTTGATCCTTTTCGTTTCTGCTCTTTGGGATGCAAGCTTGTAGGTATAAAGAAAAATGGGAATGGGAGCTTTGTCTCAAGCGCAAAGAAAGAAGAAGAAGAAGAAGAAAACGAAGAATTGTTATTGCGTGAAGGAATAATAGTAATCCACAAACAAAAACAACAAGTATACCAAATAAACACTCCTTGCTCTAATCATAATAATAATTCAAGGAGAAGAAAAGGAATACCTCAAAGGGCGCCTTTAGGATTCTAA 651 0.3625 MKVEPPWLEGLLRSTFFRICKEHMKSPRNECNMFCLDCGDHAFCFYCKSSFHNHHQVIQIRRSSYHDVVRVTEIQNVLDISGVQTYVINSARVLFLNERPQNQLKANHNNNSASNNNGKSNSHFCEICRRNLLDPFRFCSLGCKLVGIKKNGNGSFVSSAKKEEEEEENEELLLREGIIVIHKQKQQVYQINTPCSNHNNNSRRRKGIPQRAPLGF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00269 216 MobiDBLite consensus disorder prediction 193 216 - -
Aip03g00269 216 PANTHER OS08G0560300 PROTEIN 4 214 - -
Aip03g00269 216 Pfam PLATZ transcription factor 61 145 IPR006734 -
Aip03g00269 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00269 Aip-Chr3 2666750 2668933 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aip03g00269 PLATZ 1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00269 - - aprc:113859745 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00269 03 2666750 2668933 Aip03g00269 03 2666750 2668933 ECH