Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00265 ATGTCCCACCGTAACAAACCTTCTCCACCTGATTCCGCCGCCGGAAGAGGCCGCGGCCGTGGTCGTGGACCTGGTCCGGCGCAATCCGTTCCTGCTGTTCGTCCGTCAGCTCCGAAAACGTCATACGCTCCTCCTGATCCGTCAGTGCCATTTGCACCTACTGCTGCGCCCGCACCGGTGATCGGTTCATCCACCTCGATTCCTCCTCTCGCTGCTGTTGCTTCTGCTTCCGCGTCGAGCTCGACGGCGCCAGAGGCGGTGACTGCCGGCGTTGAGAAGCTCGCATTGCAGCCGGCGGCGCCACTGTCGTCGTCGAAGGCACTGCGGATTCCGAGACGGCCAGGTTTTGGAACACTCGGAAAGAAGATTCAGGTTCGCGCGAACCACTTCCTGGTTCAAGTTGCTGATCGTGATCTCCACCACTACGACGTTGCTATCACTCCTGAGGTAACTGCTAAGAGCATTAGAAGAATTCTGGTGAACCTACTGGTGACGAAGTATCTTAAGACGAACCTCGGGAATCGCATTCCAGCTTTTGACGGTAATAAGAACCTCTACACTGCTGGACGGCTACCGTTTGAGTCGCAGGACTTCGTCATCAAGCTTTCCGATGATGATCGCAAAGGTTCTTCTGCTGCTTCTGCTTCTGGTTCGGCCAGCAAAAAACGCGAAAGGGAGTTTAAAATTACGATCCGATTTGCTGCGAAGGTGGAACTTCAGAATCTTATCCAGTTCCTTAGATGCCAGCAACGGGAAACTCCACAAGATACCATACAAGCTCTTGATGTTGCCTTGCGTGCGTTGCCATCCGAAAAGTATAATATTTCGGGGAGATCGTTTTTTTCGCCATTGCTGGGGCAACAAGGGTTGCTTGGTGGTGGGATAGAATACTGGAGGGGTTATTATCAAAGTCTTCGCCCCACTCAGATGGGACTTTCGCTTAATATTGACGTGTCAGCAAGGTCCTACTATGAACCAATTCTTGTTACTGACTTCGTTGGGAAACACTTCAATCTTGATTTGTCTAGGCGTCTGTCTGACCAAGATCGTGTTAAGATTAAGAAAGCTTTAAGAGGGATCAAGGTAGAAGTTCGCAACAATGAGAATATTAGAGGCTACAAGGTTACTGGAGTCTCAAAGGAGCCCTTATATGAGTTAACGTTTACTCTTGATGATAATGCAACAAAAAAATCAGTTGTTCAATACTTTCATGAGAAATATGGTATTCAATTGAGATATCTGAATCTTCCTGCTATCCAAGCCGGAAGTGATGCAAAACCTGCCTATTTGCCTATGGAGGTTTGTTGGATTGCTTCTGGACAGAGGTACACCAAGAGATTAACTGAGACCCAGGTAACTGCACTTCTGAAGGCAAATTGTCAGCGTCCTCAAGAAAGGGAAAACTACATCAAACAGATTGCTAGGCAGAACAATTTTAACAATGACAAATACGCTCGGGAATTTGGGATTAGTGTAGCGGCGGATCTGCCATTGGTTGATGCTCGAGTTTTGCAACCTCCAATGCTGAAATATCATGACAGTGGAAAAGAAAAAATGGTTAACCCACAGATGGGTGCATGGAATATGATTAATAAGAAAATGTATGGTGGTGGGACAGTGCAACATTGGACTTGTATCAATTTTTCTAGAAGAGTGAACAGAGATTTGCCATCTCAGTTTTGTGATGAATTGATCAGCATGTGTGTTAGTAAGGGAATGATTTTCAAGAGAGAGCCTCTAATTCCTATAATTTCAGCTCAATCCAATGCAATAGAGAGAGCTCTTGCTGAACTTCATGATAAGTGTAAGAAGACGGGGAAGAACCTTGACCTTTTGATAATAATTTTACCCGACTCAAAGGGGTCTTATGGAACAATAAAGCGGAAATGTGAAACAGAACTAGGAATAGTGTCTCAGTGCTGTCTACCAAATCATGCTTATCAGATGAAGAAGCAGTATCTTGAAAATGTTTCTCTCAAGATAAATGTCAAGGTTGGTGGAAAAAACCTGGTGTTACATGATGCAGATCTCCGTAACATTCCCTTTTTATCTGATATGCCAACTTTAATCTTAGGAGCTGATGTAACACATCCACAACCAGGGGAAGACTCAGCTCCCTCTATTGCTGCAGTTGTGGGATCCATAGATTGGCCTCTGGTCACACAGTACAGAGCAATTGTTTCTGCCCAGATGCACCGTCAAGAAATCATTCAGGATCTTTATAAAACTACTGTGGTTCCGAATAAGGGAATTGTGCCTGGTGGAATGATCAGGGAGCTGCTCATGGCCTTTTACAAAAAAACAAATCGGAAGCCTGACAGGATTATATTCTACAGAGATGGAGTCAGTGAGGGACAGTTCAGTCAAGTTTTGCTTCATGAGATGGATGCAATAAGACAGGCTTGCGCCTCCTTGCAGGCAGGTTATCAGCCCCGAGTTACATTTGTCGTCGTTCAGAAACGACATCACACTCGCTTCTTCCCTGCTGATCACAGAAGACGGGATCAAACTGACAAAAGTGGAAATATACTGCCAGGTACTGTTGTGGACACCAAAATTTGCCACCCTTGGGAGCACGATTTTTACCTCAACAGCCATGCTGGAATTCAAGGAACCAGTCGACCTACTCATTATCATATGCTGTTTGATGAAAACGACTTCACTGCTGATGGATTCCAGACTTTGACTAATAACTTATGTTACACGTATGCCAGGTGCACTCGTTCAGTATCAATAGTTCCTCCTGCATATTATGCGCACTTAGCTGCTTTTCGAGCTCGCTACTACATCGAAGGTGAAATGTCAGAAGGGGATTCTGCGAGTAGGGGCGGCGGCGGTAGAGTGATGTTAGACTTGCCTGCAGTGAAGGACAATGTCAAGGAAGTCATGTTTTATTGCTGA 2901 0.4571 MSHRNKPSPPDSAAGRGRGRGRGPGPAQSVPAVRPSAPKTSYAPPDPSVPFAPTAAPAPVIGSSTSIPPLAAVASASASSSTAPEAVTAGVEKLALQPAAPLSSSKALRIPRRPGFGTLGKKIQVRANHFLVQVADRDLHHYDVAITPEVTAKSIRRILVNLLVTKYLKTNLGNRIPAFDGNKNLYTAGRLPFESQDFVIKLSDDDRKGSSAASASGSASKKREREFKITIRFAAKVELQNLIQFLRCQQRETPQDTIQALDVALRALPSEKYNISGRSFFSPLLGQQGLLGGGIEYWRGYYQSLRPTQMGLSLNIDVSARSYYEPILVTDFVGKHFNLDLSRRLSDQDRVKIKKALRGIKVEVRNNENIRGYKVTGVSKEPLYELTFTLDDNATKKSVVQYFHEKYGIQLRYLNLPAIQAGSDAKPAYLPMEVCWIASGQRYTKRLTETQVTALLKANCQRPQERENYIKQIARQNNFNNDKYAREFGISVAADLPLVDARVLQPPMLKYHDSGKEKMVNPQMGAWNMINKKMYGGGTVQHWTCINFSRRVNRDLPSQFCDELISMCVSKGMIFKREPLIPIISAQSNAIERALAELHDKCKKTGKNLDLLIIILPDSKGSYGTIKRKCETELGIVSQCCLPNHAYQMKKQYLENVSLKINVKVGGKNLVLHDADLRNIPFLSDMPTLILGADVTHPQPGEDSAPSIAAVVGSIDWPLVTQYRAIVSAQMHRQEIIQDLYKTTVVPNKGIVPGGMIRELLMAFYKKTNRKPDRIIFYRDGVSEGQFSQVLLHEMDAIRQACASLQAGYQPRVTFVVVQKRHHTRFFPADHRRRDQTDKSGNILPGTVVDTKICHPWEHDFYLNSHAGIQGTSRPTHYHMLFDENDFTADGFQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGEMSEGDSASRGGGGRVMLDLPAVKDNVKEVMFYC 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00265 966 Gene3D - 680 966 IPR036397 GO:0003676
Aip03g00265 966 MobiDBLite consensus disorder prediction 1 52 - -
Aip03g00265 966 Pfam Argonaute linker 1 domain 277 324 IPR014811 -
Aip03g00265 966 Pfam Piwi domain 612 930 IPR003165 GO:0003676
Aip03g00265 966 Pfam N-terminal domain of argonaute 121 265 IPR032474 -
Aip03g00265 966 PANTHER PROTEIN ARGONAUTE 1A 60 950 - -
Aip03g00265 966 CDD PAZ_argonaute_like 329 435 - -
Aip03g00265 966 Pfam PAZ domain 351 454 IPR003100 GO:0005515
Aip03g00265 966 Gene3D paz domain 322 444 - -
Aip03g00265 966 SUPERFAMILY PAZ domain 122 480 IPR036085 GO:0005515
Aip03g00265 966 SMART DUF1785_2 274 326 IPR014811 -
Aip03g00265 966 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 60 950 - -
Aip03g00265 966 SMART Piwi_a_2 611 931 IPR003165 GO:0003676
Aip03g00265 966 Pfam Argonaute linker 2 domain 465 511 IPR032472 -
Aip03g00265 966 Gene3D - 503 673 - -
Aip03g00265 966 ProSiteProfiles PAZ domain profile. 327 439 IPR003100 GO:0005515
Aip03g00265 966 ProSiteProfiles Piwi domain profile. 611 931 IPR003165 GO:0003676
Aip03g00265 966 SUPERFAMILY Ribonuclease H-like 606 931 IPR012337 -
Aip03g00265 966 SMART PAZ_2_a_3 336 455 IPR003100 GO:0005515
Aip03g00265 966 MobiDBLite consensus disorder prediction 38 52 - -
Aip03g00265 966 Pfam Mid domain of argonaute 521 599 IPR032473 -
Aip03g00265 966 CDD Piwi_ago-like 483 930 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00265 Aip-Chr3 2620268 2626023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00265 56 966 Eukaryotic Initiation Factors Gene Family AT1G48410 56.157 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00265 K11593 - gmx:100799033 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00265 03 2620268 2626023 Aip03g00265 03 2620268 2626023 ECH