Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00252 ATGGAGTTCTGGGGTGTTGAGGTTAAGCCAGGGGATTGCGTTAAAATAGAGGAGTTGGAAGTAGCTAATGACTACATCCACATCTCTCAGGTTGCGCTGGGAGAGGCCTCAAAGAATGAGAAATCTAAGGAGCCTGTGGTTGTCTACCTCAAAGTTGGAGTGCAGAAGCTTGTTTTGGGAACTTTGAACAGGGAGGAAATCCCCCAAATACCCTTGGATTTGGTTCTCGACCAAGAGGCTGAGCTTTCCCACACTTGCAAGAGTGCCAGTGTCTATTTCTGTGGATATAAGGCTGATCGTGATGAGGGCGTTCCTGGTGATTTTGGTTCTGATGACTATTCAGAGAGTGATGAGGAAGAGGCTGCATTGAATCTCAAAGATAATGGAAAAGTTGAAACCAAGTCTGAAAAGGTAAAGATTGCTGAACCAAAAAAGGATGTGAGTGGTGCCCCATCAAAGAAAGTCAATGTTGCTGTTCCAAAGAAAGATGAAGAGGACGAGGACTCTGATGACGACGATGATGACGTTGACGATGAGTCTGATGATGAGGATGAATCTGGAAGTGAGATGGATGCTGATAGTGATGAGGACGGGAGTGATGAAGATGAAGAGACACCTGTGAAGAAGGTCGACCAGGGCAAGAAGAGACCAAATGTGTCTGCAACAAAAACTCCAGTTCCTGCTGCTAAGAAAGCTAAGAATGTAACTCCTGAAAAGTCTGGTGGCAAGAAAATTGCACATGCACCAACTCCTCACCCCGTGAAGAAAGGTGGAAATCCGAACAGCGCAGGGAAGTTCCAGTCACCCAAAACTGGTTCACAGCAGCAGAAAAAGGGTGGAAAGAAGGGTGGTCGTTGA 858 0.4627 MEFWGVEVKPGDCVKIEELEVANDYIHISQVALGEASKNEKSKEPVVVYLKVGVQKLVLGTLNREEIPQIPLDLVLDQEAELSHTCKSASVYFCGYKADRDEGVPGDFGSDDYSESDEEEAALNLKDNGKVETKSEKVKIAEPKKDVSGAPSKKVNVAVPKKDEEDEDSDDDDDDVDDESDDEDESGSEMDADSDEDGSDEDEETPVKKVDQGKKRPNVSATKTPVPAAKKAKNVTPEKSGGKKIAHAPTPHPVKKGGNPNSAGKFQSPKTGSQQQKKGGKKGGR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00252 285 MobiDBLite consensus disorder prediction 119 149 - -
Aip03g00252 285 MobiDBLite consensus disorder prediction 164 202 - -
Aip03g00252 285 MobiDBLite consensus disorder prediction 105 285 - -
Aip03g00252 285 MobiDBLite consensus disorder prediction 261 278 - -
Aip03g00252 285 Gene3D Nucleoplasmin core domain 1 104 - -
Aip03g00252 285 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 279 - -
Aip03g00252 285 Pfam Nucleoplasmin-like domain 3 96 IPR041232 -
Aip03g00252 285 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00252 Aip-Chr3 2475462 2477681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00252 1 108 C2H2 Transcription Factor Family AT5G03740 45.370 6.54e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00252 - - gmx:547649 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00252 03 2475462 2477681 Aip03g00252 03 2475462 2477681 ECH
Aip08g00606 08 5387498 5390217 Aip03g00252 03 2475462 2477681 PCT